Biomphalaria glabrata (bloodfluke planorb): 106070971
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Entry
106070971 CDS
T07368
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3-like
KO
K08736
DNA mismatch repair protein MSH3
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106070971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgt03400
]
106070971
DNA repair and recombination proteins [BR:
bgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106070971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
CASTOR1_ACT-like
Motif
Other DBs
NCBI-GeneID:
106070971
NCBI-ProteinID:
XP_013086446
UniProt:
A0A2C9JWP2
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MLRKETDKTRLRSMSKSVIKSKFFSESTANANELKKHKRKNITNESNDHVLQKNHSVLDL
PIEINRQKTKIDDSEPDEFSDDDPAIKKLCFDQHGESSKDPCTSGSMWKHAKIELDSTTP
NTSTLDSSEQLSFRQNVSDIDRRKGSSTLVKYTPLELQFLEIKNQYSDAILFVECGYKYR
FFGEDAEIASKVLKIMCNPDHNMMTASIPVHRLPIHIHRMVSAGYKVGVVKQIETQYLKA
AGDNKGGPFSRKLASLYTKSTLVGQDVTCLNEAGANSSSLPNQYLMCVCEQNLKQQEKQI
GLVCVDPSTGDVIYDEFLDGNLYKELETRISHLQPAEILLSSDASEGIRNFIVKVVETSS
TAEDKVRVEFVSQEVVSPSKVYDIINEFYREDQNCLQSVLNLSKPVITCLATLCVYLKDF
HLDRILRITSNFHQFSQRAHYLYLNSQSVKNLELLQNTWDGTEKGSLFWLLNQTSTAFGA
RLLRKWILQPLLDVKKIQERLDAIEEIVGGSLELFCKVKEVFKKVPDLEKGLNSVFHQRC
SPQEFFSLLQSFEKIRDVTLDLEKCVVSSLLHSTLSTIYTTLHDVKTYKNNINQLAVRDN
DITSLFLNTEQYPLIHECKKKISDICLCLNDHLADVRGVLKLPALQYATVFKLEYLIEVK
QSHIETVPTDWIFINSTNVVSRFHTPFIAEKYCRLKELKEELVIHTNVAWQELLQQFSSH
YIRYKQAVSELATLDCLLSLANVASQDSFCKPKLVDGPAHIDIIDGRHPIIDTLKQGQDQ
YVPNSTHLHSSGLRIQVLSGPNMGGKSSYLRQVALIVIMAQMGSYVPAASASIGIVDSIF
ISMGSADRLYSCQSTFMVELLEVSDVLAQVTDRSLVILDELGRGTSTHDGVAIAYATLEH
LIKDHKCLLVFVTHFPMLFKLCELYPQSVINSYMAVQYNEDNADSDAAITFLYELTEGCA
AKSYGLNVARLASIPDCILNLAHRKAQELENQMSSKVQFGQLFGAEARNLKSLLEEQHKG
NTSHSIFK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaaagaaactgataaaactagacttaggtctatgtctaagtcagtaattaag
tctaagttcttttctgaatctaccgccaatgccaatgaattaaagaaacataaaaggaaa
aacatcacaaatgagtcaaatgaccatgttctacagaaaaatcacagcgtcttagatctt
cctattgagatcaatcggcagaaaactaaaattgatgattcagaaccagatgagttcagt
gatgatgatccagccattaagaaactctgtttcgatcaacatggggaatcaagcaaagat
ccctgcacatcaggttctatgtggaagcatgcaaagattgagttggattctacaacacca
aatacttcaacattagactctagtgaacaactaagttttaggcaaaatgtttcagatatt
gatagaagaaaaggcagctctacattggtgaagtacactcctttggagttacagttcttg
gaaatcaagaaccagtactctgatgctattttgtttgtagaatgtggctacaaatataga
ttttttggtgaggatgctgagatagcctctaaagttttgaagatcatgtgtaaccctgat
cacaatatgatgactgcaagtatccctgtccaccggctaccaatccacattcaccgaatg
gtatcagctggctataaggtgggtgttgtgaaacaaattgaaactcaatatctcaaggca
gcaggagataataagggtggtccattctctcgcaaactagcttcattgtacacaaaatca
actttggttggtcaagatgtgacttgtttgaatgaagctggtgccaacagcagctctcta
ccaaaccagtatctaatgtgtgtatgtgaacagaatctcaagcagcaagagaaacaaatt
gggcttgtttgtgttgatccaagcactggggatgtgatttatgatgaatttttagatggg
aatttgtacaaggaactagagactcgcattagtcatcttcagccagcggaaattttatta
tcttctgacgcttctgaggggattagaaattttattgttaaagtggtagaaacaagttct
acagctgaagacaaggttagagttgagtttgtgagtcaagaggtagtctccccttctaaa
gtatatgacatcattaatgaattttacagagaagatcaaaactgtcttcaaagtgtcttg
aatctctcgaagcctgtaattacctgcctggcgacactgtgtgtttaccttaaagatttt
catttggacagaattctgagaataactagtaacttccatcagttttcccagcgtgcccac
tacttgtatctaaacagtcagtcagtgaaaaacttggaacttctacagaacacatgggat
gggactgagaaaggatctttgttttggctgctgaaccagacatctactgcttttggtgcc
aggttgcttagaaaatggatattgcaaccactgctagatgtcaaaaaaattcaagaacgt
cttgatgcaattgaagaaattgtgggaggttcccttgaactattttgcaaggtgaaagaa
gtttttaaaaaagtacctgaccttgagaaaggcttaaactctgtgtttcatcaaaggtgc
tctcctcaggagtttttctccctcttgcaatcttttgaaaaaatcagagacgtaacttta
gacctggagaaatgtgtggtgtcatcgcttctacattcaaccctctctacgatttacact
actttacatgatgtgaagacgtataagaacaatattaaccagcttgcagtaagagataat
gatatcaccagtctttttcttaacactgagcagtatccattgatccatgagtgtaaaaag
aaaatttctgacatatgcctttgcctaaatgatcatctggctgatgtcagaggcgtatta
aaactacctgctctgcaatatgctacagtatttaaactagagtatcttatagaagtcaaa
caaagtcacatagagactgtacccacagattggatttttatcaatagcactaacgttgtg
tccagatttcatacacctttcattgctgagaaatactgtaggttgaaagagcttaaggag
gagcttgtcattcacactaatgtggcatggcaggaattgttacagcagttttcttcccat
tacattcgatacaagcaggcagtctctgaactggccactcttgattgtttgctgtctcta
gcaaacgtggcatcacaagattctttttgcaagcctaaattagttgatggaccagctcac
attgatattattgatggtcgacatcccatcattgatactttaaaacaaggacaggaccag
tatgtcccaaacagcacccatctacacagttctggtcttcgtattcaagtgttatcagga
cccaatatgggaggtaagagttcttacctgagacaggtggcacttattgttataatggct
cagatgggttcctatgtacctgctgcttctgcttctattggcatagtggattccatattt
atcagtatgggttcagcagatagactctacagttgtcagagcactttcatggtggagctg
ctggaggtatctgatgtattggcacaagtaactgacaggtccctggtcatcttagatgag
ctgggtcggggcaccagcacccatgatggtgtggcaattgcttatgcaactctagaacat
ttaatcaaagatcacaaatgtttactggtgtttgtgacccatttcccaatgctgttcaaa
ctttgtgagctgtacccacagtctgtgattaacagctacatggctgtacagtacaatgaa
gacaatgcagattcagatgcggccataacatttctttatgaactaacagaaggttgtgct
gccaaaagttatggtctcaatgttgccagattggcctctataccagactgtattcttaat
ttggctcatcgtaaagctcaagaactagaaaatcaaatgtcatcgaaagtccagtttggt
cagttgtttggagctgaggctagaaacttaaagtctctcttggaagaacaacacaaagga
aatacctcacattctatctttaaatga
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