Biomphalaria glabrata (bloodfluke planorb): 106071476
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Entry
106071476 CDS
T07368
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03030
DNA replication
bgt03410
Base excision repair
bgt03420
Nucleotide excision repair
bgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106071476
03410 Base excision repair
106071476
03420 Nucleotide excision repair
106071476
03430 Mismatch repair
106071476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgt03032
]
106071476
03400 DNA repair and recombination proteins [BR:
bgt03400
]
106071476
DNA replication proteins [BR:
bgt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106071476
DNA repair and recombination proteins [BR:
bgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106071476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_RFC1
BRCT
AAA
AAA_22
AAA_16
AAA_14
BRCT_2
AAA_33
nSTAND3
PTCB-BRCT
AAA_30
RuvB_N
RNA_helicase
AAA_19
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
106071476
NCBI-ProteinID:
XP_013087047
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MDIRKFFNPSSASKSSTTPPNKDIRKYFGSSAANKNNTEPGKETSITDNKKSTVRAKADK
LKSPPRKTQIKPKSIGKSPKKSEPSVPTRSSPRKKASLSVYIEEPVLIDDDSDNDVVSDS
QDLSDTYKKVNGFYTNTASKNKGSGKKEKLTSKTKEQNDTKSSANAKKSEEIVDIESVHS
SGSSSSKTATRSKSNKTNDKIKKGKSSEPLVKEIQKEEKTTRQSPRKSPSTTDSKRAKKR
KQQISSDEEEILIVKNDSSDDEDEPKSRSRSKTVIKSSRILDSDSDDENPVMEEKPKAKR
KKKESKVYVDDSDNEKKVTALDKFVIHKTKTDSGLGQETKTEKGKSELKLVNVNAADFFG
TAAVTRSDRSMAVTKRKHEEMEKSCQVVDVDIVFDEELHDDEDFMKTLDQLDGPNVKKVK
QCEAEVREITKEVKPVSLASKLSAKVKQENFKAERNPGDEHEVTCELLELKETQKNVKRE
TPLKQIPQKTSPLKQSPLKQTVQNTSPQKQSPLKTSPLKQTPQKMSPFKQTTRTPISANK
RTPSDNDGSSARKLAGFQAYKQRTGPQHLGSKEIPEGADNCLEGLTFVITGVLDSIERDD
AKSVVEKYGGKVTASVSGKTSYLVVGREPGESKISKASKLKVKQIDEDGLLDLIRTLPGR
VSKYELQAKEQLKKEAAIKDLQNKNSKKLESFRSPKGEKQKSSVEPSSFTQIKNAVGVSS
VGSGSPASSKLLSQSQPSPPSPAPATQSEVLLWVDKHKPTTLKNIIGQQGEKSNAKKLLH
WLKHWHENIIVKGIKSSGSFFNKGDGAGNRAALLSGPPGIGKTTTATLVCQEAKFSYVEL
NASDCRSKRNLKEVVAESLNNQTLVDYMGDRKGSTLPSGQSHCIIMDEVDGMAGNEDRGG
LQELVQLIKNTKIPIICICNDRNSMKMRTLSNYCLDLRFQRPRVEQIKGAMMTLAYKEGL
KIPPAALNEIIAASNHDIRQIIHNMSMWSACDKTLSYEQVKLDAAKAHKDVRLGPFDVCR
KVFVSDEETRKMTFNDKSDLFFHDYSFGPLFVHENYPNIIPMSAG
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaggaagtttttcaatccaagttcagcatccaaaagctcaactacacctcct
aacaaggacatcagaaaatattttgggtcatcagcagcaaataaaaataatacagaacct
ggaaaggaaacaagtattactgacaataaaaaaagtacggttagggcaaaagctgataaa
cttaaaagcccgcctagaaagacccagataaaacccaaaagtattggcaagtcaccaaaa
aaaagtgagccatctgttccaacaagatcttcccccagaaagaaagctagcctcagtgtg
tacatagaagagccagttttaattgatgatgattctgacaatgatgttgtcagtgattcc
caggatttaagtgatacttacaagaaagtaaatggtttttatacaaacactgccagtaaa
aacaaagggtcaggaaaaaaagaaaaacttactagtaaaactaaagagcaaaatgacact
aaaagttcagctaatgctaaaaagtcagaagaaattgtggacattgaaagtgtccattca
tcaggttctagtagttccaaaactgctacaaggtcaaaatcgaataagacaaatgataaa
attaagaaaggcaagtcaagtgaaccactggttaaagaaattcagaaagaagaaaagaca
accaggcagagtcctagaaagtcaccttccacaacagatagtaagagggcaaagaaaaga
aaacagcagatttctagtgatgaagaagagattctaattgtcaaaaatgattcctctgac
gacgaagatgagccaaagtccagatcaagaagtaaaactgtaataaagtcttcaagaatc
cttgactcagattcagatgatgagaatccagtaatggaggagaagcctaaagccaaaaga
aaaaagaaagaatctaaagtgtatgtagatgattcagataatgaaaagaaagtgacagct
ctagacaagtttgttattcacaaaactaaaacagactctggacttgggcaagaaactaaa
acagagaaaggaaagtctgagttgaaacttgtgaatgtgaatgcggcagatttctttggt
actgcagcggttactagaagtgatcggtcaatggcagtgaccaaaagaaaacatgaagaa
atggaaaagtcttgccaggtggttgatgttgacatagtgtttgacgaagagctgcatgat
gatgaggactttatgaagacccttgaccagcttgatggacctaatgttaaaaaagttaaa
cagtgtgaagctgaggtcagggaaatcacaaaagaggttaaacctgtcagtctggctagt
aaattgagtgctaaagtcaagcaagaaaactttaaagctgagagaaatccaggcgatgaa
catgaggtaacctgtgaactacttgaactgaaggaaacacaaaagaatgtgaaacgggaa
acacccctgaagcagataccacagaaaacatcacccttgaagcaatcacccctgaaacag
acagtccagaacacatcacctcagaagcagtcaccattgaaaacatctcccctgaaacag
acacctcagaaaatgtctcctttcaaacagacaaccagaactcccatctctgccaacaag
cgaacaccttcagacaatgatgggtcaagtgctaggaaattggctggattccaggcttat
aaacaaagaactggaccacaacatctaggttctaaagaaattcctgagggtgctgacaat
tgtctggaaggtctgacatttgttatcactggagttttggattctatcgagagagatgat
gcaaagtctgtggtggagaagtatggaggtaaagtcacagccagcgtgagcggtaaaaca
agttacctggtagtagggcgtgagccaggtgaaagtaaaatttccaaggcctccaagctc
aaagtgaaacaaatagatgaagatggactattggatcttatcagaacattgccaggaaga
gtttccaaatatgaacttcaggccaaagagcagctgaaaaaagaagctgctatcaaagat
ttgcagaacaaaaattctaaaaaactggaatctttcagatctcctaaaggtgaaaaacaa
aaaagctcagtagagccatcctcatttacccaaataaaaaatgcagtgggagtcagctct
gtgggctctgggtctcctgcttcatcgaagttactaagtcagtcccagccttctcctccc
tcccctgccccagccacccagtcggaagttttgttatgggtagacaagcacaagccgacc
actttgaagaacattattggtcagcaaggggagaaaagcaatgccaaaaaacttttacac
tggttgaagcactggcatgagaacatcatcgtaaaaggtatcaagtcatcaggaagtttt
ttcaacaaaggagatggtgctgggaatagggcagctttgttatcgggcccacctggcatt
ggaaagacaaccacagcaactcttgtctgtcaggaagctaaattttcatatgttgagctc
aatgcttcagattgccgcagcaaaagaaacttgaaggaagttgtggcggagtctctgaac
aaccagacccttgtggactacatgggggatcgcaaaggatcaaccctgccctctgggcaa
tcccactgcatcatcatggatgaggtagatggtatggctggcaatgaagacaggggagga
ctccaggaactcgttcagctcatcaagaacaccaagattcccatcatctgcatctgcaat
gaccgcaactctatgaaaatgaggactctgtccaattactgcctagatttgaggttccag
aggcctagagtagagcagatcaaaggggctatgatgaccctggcttataaagagggcctg
aagattccgccggctgcacttaatgagattatagcagcctcaaatcatgatatcagacag
attattcacaacatgtcaatgtggagtgcctgtgataagacattgagctatgagcaagtc
aaattggatgcagccaaagcacacaaggatgtccgacttggtccatttgacgtctgccgc
aaggtgtttgttagtgatgaggaaacaagaaaaatgaccttcaatgacaaatctgatttg
ttctttcatgattacagctttgggccgctttttgtccatgaaaactatccaaatatcatt
ccaatgtctgcagggtaa
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integrated database retrieval system
