Biomphalaria glabrata (bloodfluke planorb): 106071584
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Entry
106071584 CDS
T07368
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106071584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgt03021
]
106071584
03036 Chromosome and associated proteins [BR:
bgt03036
]
106071584
Transcription machinery [BR:
bgt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106071584
Coactivators
SAGA/TFTC/STAGA complex
106071584
Chromosome and associated proteins [BR:
bgt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106071584
STAGA complex
106071584
TFTC complex
106071584
SAGA complex
106071584
SLIK complex
106071584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
WDR54
PROPPIN
WD_LRWD1
PEP5_VPS11_N
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
106071584
NCBI-ProteinID:
XP_013087178
UniProt:
A0A2C9LWN5
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MKRSKNDHIRSTISRYFKRRQFVESEMPARKDAQREQSVTDMSVRRRTRSRTSVENSLAL
TSISGDATACDQQFTRMKAFILGASAPYHTELQPLLFPLFAHTYLEMLSNGQKVPAQKFH
ERHSETFKEEQYQSFIKVLKKLEAKSDVLTTKEVIEFREHRFILNLSEESFHYMMLHLKA
EDNMIMLQIFNQYIKINVVQNAGVVCGSKLEMKQLPDVLAESQVIKESPASVAPVIDGQQ
QEPTLEDELAVAIKAVRELPPCLPSICFFTFLNTYQGFGRSTQSTETAKLVGHRGPVYKS
RFLSDSKTYLLSCSEDSTIRLWNLGTQTNASLYVGHSSAVWDVNISSTDTWFASCSHDTT
AKLWTFERTYPLRSYIGHTFDVDCLDFHPNNNYLATGSGDKTVRFWSVSEGRTVRLLQGH
RGSVLALAFSPNGKLLASAGEDRRIRVWDLGSGQVLKDLRGHSDTVFALAFDDTSSILAS
GGADCCVRLWDIQKTTDSQQIEGHSSPELLGAFPTKSALLSYLRFAPYNILLAAGASS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtcaaagaatgaccacatacgctcaacaatcagccgctatttcaaaagaaga
caatttgtggaaagtgaaatgcctgctcggaaagatgcacaacgtgagcagtctgttaca
gatatgtcagtacgaaggcggacacgttcgagaacaagtgttgaaaactcgctagcactg
accagcatatctggagatgcaacagcttgtgaccagcagttcactaggatgaaagctttt
attttaggagcctctgcaccataccatacagagctacagcctttgttatttcctcttttt
gctcacacatatttggagatgctgtccaatggtcagaaagtacctgctcaaaaatttcat
gagagacactcagagacatttaaagaagagcaatatcagtcgttcattaaagtgttaaag
aaactggaagccaaaagtgatgttcttacaacaaaagaagttatagagtttagagaacat
cgtttcatattgaacttgagtgaagagtcctttcattacatgatgctacatttaaaggct
gaggataacatgatcatgcttcagatttttaatcaatatatcaaaattaatgttgtgcaa
aatgctggtgtggtgtgtggcagcaagcttgaaatgaaacaacttccagacgttctagca
gaatctcaagtcatcaaagaatctccagcatctgttgccccagttattgatggtcagcaa
caagaaccaacactggaagacgaacttgccgttgctatcaaagctgtcagagagctgcct
ccttgcctaccatctatatgtttcttcacatttttgaacacttatcaaggttttggcaga
tcaactcaaagtacagaaacagccaaactagtcggtcaccgtggccctgtatataaaagt
agatttctgtctgattccaaaacctatttactctcctgttctgaagattccactatcaga
ttatggaacttgggaacacagacaaatgcctctttgtatgttggtcacagttcagcagtt
tgggatgtcaacatcagctcaactgacacttggtttgccagctgttcccatgacaccacg
gccaaactgtggacatttgaacgaacatatcctctccgctcatacattgggcacaccttt
gatgtcgattgcttagacttccatcctaacaataattatttggctactggatctggggat
aaaactgtacggttttggagtgtatctgaaggtcgcacagtaagattgctacagggtcat
cgaggttcagtattggccttggctttctcccctaatgggaaattgctagcttctgcaggt
gaagatagaagaatacgagtgtgggacttgggtagtggacaagtcttaaaagatctgcga
ggtcacagtgacacagtttttgcattagcctttgatgataccagctccattttggcttct
ggtggggcagactgctgtgtcaggctttgggacattcagaaaaccacagactcacagcaa
attgaaggccattcttcccctgaattgttgggagcattcccaacgaagtctgcccttctc
tcctatctcagatttgcaccttacaacattcttctagctgcaggagctagttcctga
DBGET
integrated database retrieval system
