Biomphalaria glabrata (bloodfluke planorb): 106072161
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Entry
106072161 CDS
T07368
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106072161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106072161
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106072161
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106072161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
DUF1722
Motif
Other DBs
NCBI-GeneID:
106072161
NCBI-ProteinID:
XP_013087934
UniProt:
A0A9U8EI00
A0A2C9JXP4
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MEASRICVPGQRLCRVDDMHVPGNGTYASDGFIYSSILGYWNERVNSESKEKVIDVLNSY
AQTVIPFIDAIVTARVTNINPRYCKCEILTVGDKPLSDFYRGLIKKEDVRTTEKDRVELY
KCFRPGDIIIARVISLGDAQSYILSTAENELGVIIGMSQDGIKMVPTSWCKMQCPKTLNE
EFRKVAKVQKEYIRIAEHFF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctcacgaatttgtgttccaggtcaacggttatgtcgcgttgacgatatgcat
gttcctggaaatgggacgtatgccagtgatggatttatttactcaagtattttgggttac
tggaatgaacgagttaacagtgagagcaaggaaaaagtgattgatgttcttaatagttat
gctcaaacagtgattccttttattgatgctatagtaacagctagagtaacaaacatcaat
ccaagatattgcaaatgtgaaattcttactgttggagacaaaccactgtcagatttttac
agaggccttataaaaaaagaggatgttaggactactgaaaaagatagagtggaattgtat
aagtgctttcgccctggagacatcattattgctcgtgttatatcattaggagatgcacag
tcctatatattgagcacagctgaaaatgaacttggagtaattataggcatgagtcaagat
ggaataaaaatggttccaactagttggtgtaagatgcagtgtccaaaaacactcaatgaa
gaatttcggaaagtggctaaagtgcagaaagaatacattagaatagcggaacacttcttt
tga
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