Biomphalaria glabrata (bloodfluke planorb): 106072854
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Entry
106072854 CDS
T07368
Name
(RefSeq) LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106072854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106072854
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106072854
Spliceosome [BR:
bgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106072854
Complex C
U5 SnRNP specific factors
106072854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
DEXQc_Suv3
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
106072854
NCBI-ProteinID:
XP_013088758
UniProt:
A0A2C9JJQ4
A0A9U8EI47
LinkDB
All DBs
AA seq
2143 aa
AA seq
DB search
MADATARSLQYEYKANSNLVLSVDRTLIDRRARDEATGEVMSLVGKLTNTRMGDKALKSK
PPMMEERKLKRRKRDEAQHDMIKMKGTTLLSEGIDEMVGILYRPKTTETRQTYEVLLNFI
QAALGDQPRDXLCGAADEVLIVLKNDRMKDKEKKKEVENLLGELADERFALLVNLGKKIT
DWSQEEKVQTSETIDFDETYGVNVQFEESDDEDTGNLYGEVQEEGDGEEDNEGEEAAFDA
TLHANLSEEDKNKKDRGLQPREIDAFWIQRKISKFYPDDPNMAQSKANEVLEILKTAGDD
REAENKLVMLLDVSHFEFIKVLRQNRQMILYCTLLAQAQTASEKKKIEQKMSNDPELSII
LKSLKATDQDDIVSEERARRQQARQSRVAADIEAMDVDEEEEVGPVQTLYLEDLVFSQGS
HLMANKRCQLPDGSYRKQRKGYEEVHVPALKPKPFDNEETLVSIDRLPKYAQAAFEGFKS
LNRIQSRLFQAAIESDRNLLLCAPTGAGKTNVALLTIMREIGKHVNADGTINADDFKIIY
IAPMKSLAQEMVGNFTERLSSYNLKVQELTGDHQLTREQIAATQVIVCTPEKWDIITRKG
GEKTYTQFVKLVIFDEIHLLHDDRGPVLESLVARTIRTIETTQEDIRLVGLSATLPNYED
VAAFLRVDPREGLFFFDNSFRPVPLEQQFIGITEKKAIKRFQLMNDIVYEKVIEHAGKNQ
VLVFVHSRKETGKTARTIRDMCLEKDTLGLFMKEGSASTVVLRQEAEQVKSSELKDLLPY
GFAIHHAGMNKVDRKLVEDLFSDRHIQVLISTSTLAWGVNLPAHTVIIKGTQIYSPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGIMITNHSELQYYLSLMNQQLPIESQFISKLADN
LNAEVVLGSIHNIKEAVDWLGYTYLYIRMLRNPTLYGVSHDLLKEDPLLQQRRKDLVHTA
ACMLDKNGLLKYDRKTGNLQMTELGRIASHYYITNESMATYNQLLKPTLSEIELFRVFSL
SSEFKYIVVREEEKLELMKLLERVPIPIKESIEELSAKVNVLLQAYISQLKLEGFALMVD
MVYITQSAGRLMRAIFEICLHHGWAQLVDKALALCKMVDKRMWQSMTPLRQFRKIPDQVI
KKIEKKNFPFERLYDLNHNEIGELLRLPKMGKPIHKYIRQFPRLELSVHIQPITRSTLKV
ELTITPDFQWEEKLHGHSEAFWLLVEDVDSEAILHHEYFLLKSKFATDEHVLKFFVPVFE
PLPPQYFIRVISDRWIGSETQLPVSFRHLILPERYPPPTELLDLQPLPITALRNPKFESL
YSKKFPIFNPIQTQVFNAIYNSDENVFVGAPTGSGKTICGEFAVLRMFSQNPEGRCVYVA
PLDALAQQIYVDWHNKFAGILGKKVVLLTGETGTDLKLLAKGNIVISTPEKWDVLSRRWK
QRKNVQNVNLFIIDELHLIGGEVGPVLEVICSRMRYISSQLERNIRIVALSSSLSNAKDV
AQWLGCPTSAFFNFHPNVRPVPLELHIQGFNVSHNASRVIAMAKPSYQAIIRHSPKKPVI
IFVPSRKQTKLTAIDILTCAAAEMQSGGDGKPYNRFLHVQEEDLAPFLEKITDLTLKETL
ANGVGYLHGGLSEIERKCVEQLFTSGAVQVVVVARGLAWGINVSAHLVIVMDTQYYDGKM
HSYEDYPAHDVLQMIGKANRPLLDKEGKAVIMCQSSKKEFFKKFLYEPLPVESHLDHCLH
DHFNAEIVTKTIENKQDAVDYLTWTFIYRRMTQNPNYYNLQGVSHRHLSDHLSEIVENTI
NDLEQSKCINVEEDFDVYPLNLGMIAAYYYINYKTIELFSMSLNNKTKIKGLIEIVASAD
EYESMPIRHGEPTILKQLGSRLPNKITNAKFNDPHVKTNLLLQAHLSRMQLSAELQSDTE
DILNKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSSLKQLPHFTADIIKR
CQEKNLESIFDIMEMEDKDRSELLQLSESEMADVARFCNRYPNIELTYEVQDKDSIRSGS
NINVTVTLEREDEITGPVIAPFFPQKREEGWWVVIGDPKNNSLLSIKRLTLQQKAKVKLD
FVAPAHGRYNYVIFFMSDAYMGCDQEYKFTVDVKEGESDSDSD
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccacagctcgttcgcttcagtatgaatataaagcgaactccaatcttgtc
ttgagtgtagacaggacactcatagatagaagagctagagatgaagccactggggaagtt
atgtctcttgttggtaaacttaccaacacaagaatgggagataaagcactcaaaagcaaa
cctccaatgatggaagaaagaaaattgaagcgaaggaagagagatgaagcacagcatgac
atgatcaaaatgaaaggaacaactttgctttctgaaggcattgatgaaatggtgggaata
ttatacagacctaaaacaacagagactcgacagacttatgaagttttgttaaatttcatt
caagcagcccttggagatcagcctagggatngtctgtgtggcgcagctgatgaagtatta
atagtgcttaaaaatgacagaatgaaagataaagaaaaaaagaaggaagttgaaaatctt
ttaggggaattagcagatgaaaggtttgctcttctagtcaatttgggaaagaaaataaca
gactggagtcaagaagaaaaggttcaaacaagtgaaactattgacttcgatgaaacctat
ggtgtcaatgtgcagtttgaggagtctgatgatgaggatacaggaaatttatatggtgag
gtacaagaagaaggggatggagaagaggacaacgaaggagaggaggcagcttttgatgct
acattacatgctaatttatcagaggaggataaaaacaaaaaagatagaggtttgcaacct
cgtgaaattgatgccttttggatccaacgtaaaattagcaaattctaccctgatgatcca
aacatggcccaaagtaaagctaatgaagtcttagaaatattaaagactgctggggatgac
agagaggcagagaataaacttgtgatgttacttgatgtttcacattttgaattcatcaaa
gtcttgagacaaaacagacaaatgattctatattgcaccctgttggcccaagcacaaaca
gcatcagaaaagaagaaaattgagcagaaaatgtctaatgatccagagctgtctattatt
ttgaagtcgctgaaagccacagaccaagatgatattgtcagtgaagagagggcccgaaga
cagcaggccagacagtcacgtgtggctgctgacattgaagctatggatgtggatgaagag
gaagaggttggtcctgtacaaacactttatctagaagacttagttttctcacaaggcagc
cacctcatggccaataaaaggtgtcagctacctgatggctcctacagaaaacaaagaaag
ggatatgaagaagttcatgttccagctttaaagcctaaaccatttgacaatgaggagact
ttggtatctattgatcgactgcccaaatatgcacaagcagcttttgagggatttaaaagc
ttaaatcgtattcagagtagactattccaagcagccattgaaagtgatcgaaatctactg
ctgtgtgctccaacaggtgctggtaaaactaatgttgctttgttgacaattatgagagag
attggcaagcatgtgaatgctgatgggacaattaatgctgatgatttcaaaattatctac
attgccccaatgaagtctctggctcaagaaatggttggcaattttactgagcgtttgtct
tcctacaatctgaaagttcaagagttgacaggtgaccatcaactgacaagagaacaaatt
gctgcaacacaagtgattgtgtgcacaccagaaaagtgggatattattacacgaaaggga
ggagaaaagacctacactcagtttgtcaagctggtcatatttgatgaaattcatcttctt
catgatgatagaggccctgttttggaatctctggttgcaaggactattcgtaccattgag
actactcaagaagatatccgacttgtaggcctcagtgcaacattgcctaactatgaagat
gttgctgcatttttaagagtggacccaagagaagggcttttcttttttgacaacagcttc
cgccctgttcctctggagcaacagtttattggtatcactgagaagaaagcaattaaacgt
ttccaacttatgaatgatattgtctatgaaaaggtgattgaacatgctggaaagaatcag
gtcttggtgtttgtccattcaaggaaggagacaggaaagactgccagaactattagagat
atgtgcttagagaaagatactttaggtcttttcatgaaagaaggctcagcatctactgtt
gtattgagacaagaagcagaacaagtcaagagtagtgaattaaaagatttactcccctat
ggctttgcaattcatcatgctggaatgaacaaagttgaccgcaagctggtggaagacttg
ttcagtgacagacacattcaagttctcatctccacttcaactcttgcatggggtgtgaat
ctgcctgcacacactgtcattatcaagggaactcagatttatagtccagagaaaggacgt
tgggttgaattgagtgctctagatgtgttacagatgcttggtagagctgggcgtcctcag
tatgataccaagggagaaggtatcatgataaccaaccacagtgaacttcagtattattta
tctttgatgaaccagcagttacctattgagagtcagttcatcagtaaacttgctgacaat
ctgaatgctgaagtagtcctgggttctattcataacattaaagaagctgtggattggctt
ggatacacgtatctttacattcgaatgcttcgaaatccaaccttgtatggtgtgtcacat
gacttactaaaagaggatcccctgttgcaacagaggagaaaagatcttgttcacactgct
gcttgcatgcttgacaaaaatggattgttgaaatatgacagaaagacaggcaaccttcag
atgactgaacttggacgtattgctagccactattacatcaccaatgaaagtatggccact
tacaaccagttgttaaagccaactttgagtgagatagaattgttcagagttttctccctt
tcatcagaattcaagtatattgttgtcagagaggaagagaaactggagctgatgaaatta
ttggaaagagtcccaataccaatcaaagaaagtatagaagagctaagtgccaaggtgaat
gttcttctccaagcctatatctcacaactgaaattggaaggttttgctttgatggtagat
atggtgtacattactcagtctgctggtcgacttatgagggcaatatttgaaatctgttta
catcatggctgggcccagctggtggacaaagctctggcattgtgtaaaatggtggataag
agaatgtggcagtcaatgacacctctcagacagtttagaaagatccctgaccaagtcatc
aagaagattgaaaagaaaaactttccatttgagcgtctgtatgatctgaatcacaatgaa
atcggagaactgctcaggctgccaaaaatgggaaaacccatccacaagtacattcgccag
tttccacgtttagaactttctgtacacattcaacccatcactagatctacattgaaagtt
gaacttacgatcacaccagactttcagtgggaggaaaaacttcatggccattccgaggct
ttctggttactagttgaagatgttgatagtgaagccattcttcatcatgaatactttcta
ttgaaaagtaagtttgccactgatgaacatgtgctgaagttttttgtgccagtttttgaa
cctcttccacctcagtatttcattcgagtcatctctgatagatggattggttcagaaact
caacttcctgtatcattccgtcatctgatattacccgagagatatccaccacccactgaa
ttgttggacctacaaccactgcccattactgctttgagaaatcctaaatttgaatctttg
tacagtaaaaagttccctatttttaaccccattcaaacacaagtgttcaatgctatctac
aacagtgatgagaatgtgtttgttggagctcccactggtagtggtaaaactatttgtggt
gaatttgcagtcctaagaatgttttcccagaaccctgaaggtagatgtgtgtatgtagct
ccattagatgctcttgctcaacagatctatgtggattggcacaataagtttgctggaatt
ctgggtaaaaaagttgttctactcactggtgaaactggcacagatttgaaacttttagcc
aagggcaacattgtcatctccaccccagagaaatgggatgttttatctcgaagatggaag
cagagaaaaaatgttcaaaatgtgaatctctttattattgatgagcttcatttgattggt
ggtgaagttggacctgttcttgaagtaatttgttctcgtatgcgctacatctcatctcaa
ctggaaagaaacatcaggattgttgcactgagctcatcattgtccaatgccaaagatgtg
gcccaatggttgggttgtccaacttcagcattttttaacttccaccccaatgttagacct
gttccattggagcttcacattcagggattcaacgtttcccacaatgcctctcgtgttatt
gccatggccaagccttcctatcaagcaataattcgacattctcccaagaaaccagtgatt
atctttgtgccatctcgtaaacaaaccaaactgacagccattgacatcctaacttgtgct
gcagcggagatgcagtctggtggagatggcaagccttacaacagattcctgcatgttcag
gaggaagatttagctccattccttgagaaaatcactgatttgacacttaaagaaacactt
gctaatggtgttggatatcttcatggaggcctctctgaaatagaaagaaaatgtgtggag
cagttgttcacatctggtgctgtgcaggttgttgtggtagccagaggactggcttgggga
atcaacgtttcagcccatctggtaatagtcatggacacacagtactatgatggaaagatg
cattcttatgaggattacccagcacatgatgttctgcagatgattggaaaggcaaacaga
ccactgttggataaagaaggtaaagctgtcatcatgtgtcagagttcaaagaaagaattt
ttcaagaaatttttgtatgagcctttacctgtggagagtcatttagatcattgtctccat
gaccattttaatgctgaaattgtgactaaaacaattgagaacaaacaggatgctgtagac
tacttaacttggaccttcatctacagacgcatgactcaaaaccctaattactacaacttg
caaggtgtgtcccatcgtcatctgtcagatcacttatcagaaattgtggaaaacacaatc
aatgatctggagcaatcaaagtgcatcaatgttgaggaagactttgatgtgtatccactc
aacctgggcatgattgctgcttactactacattaactataaaactattgaactgttcagt
atgtctttgaacaacaaaacaaagataaagggacttattgaaattgtggccagcgctgat
gaatatgagagtatgccaattagacatggagagccaacaatcctcaaacagttgggaagc
cgtttgcctaacaaaatcacaaatgctaagttcaatgatccacacgtcaaaaccaacttg
ctcttacaagctcatttgtctcgtatgcaactgtctgctgagttacagagtgatacagaa
gatattctcaataaggccatacgtctgatacaagcttgtgtggatgttttaagtagcaat
ggctggctaagtcctgctttagcagctatggaacttgctcagatggtcacccaagcaatg
tggtcaaaggattcctctcttaaacaacttccacatttcactgcggacatcatcaaaagg
tgtcaagagaagaatctggagtccatctttgacatcatggagatggaagataaagacaga
agtgaacttcttcagttaagtgagtcagaaatggcagatgtagctcgcttctgtaacaga
taccccaatattgaacttacttatgaggtgcaggacaaggacagcattcgcagtggttct
aacattaatgttactgtgaccttggagagagaggatgaaattactggccctgtcattgct
cctttcttcccacagaaacgtgaagagggctggtgggtagtgattggcgatcccaaaaac
aattcccttctgtccatcaaacgtctgactcttcagcaaaaggccaaggtgaagttagat
tttgtggccccagcccatggaagatacaactatgtcatcttcttcatgagtgatgcctac
atgggctgtgaccaggagtacaagttcacagtggatgtgaaggaaggagagagtgacagt
gacagtgattga
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