Biomphalaria glabrata (bloodfluke planorb): 106073673
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Entry
106073673 CDS
T07368
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgt03041
]
106073673
Enzymes [BR:
bgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106073673
Spliceosome [BR:
bgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106073673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
OB_NTP_bind
R3H
Ank_5
Ank_2
DEAD
HA2_N
Ank_3
Ank
AAA_19
nSTAND3
FtsK_SpoIIIE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106073673
NCBI-ProteinID:
XP_013089748
UniProt:
A0A2C9KSD3
LinkDB
All DBs
AA seq
1520 aa
AA seq
DB search
MPRKDPNRSERGPKLHESVCIGEDVKIGIHLAIQRFRLDPDSQELSFPSSFSTTERAYVH
RYCCQLGSLKTWSRGNGQNRYITVRKVEGGRNSRTLPSLFSLAHSAAQLNTLLNKYPVTV
KEKQDLTVITDRGSNLNDSKVVLVAGETGSGKTTQVPQLILDDYCERQLPCRILCTQPRR
IAALSVSERVALERGERLGHTVGYQIRLDSKISPKTILTFCTTGVLLRTFMGGDACLSTV
THILVDEVHERDRFTDFLLLCLKEALPRHPNLHLILMSATLNLDLFSGYFNNCPVVCVAG
NLFQVTEYFLEDILKWTGHVNKLIDKDVTKKQKFKKQEEQLTEWCSKQLTLSDTTPGSGT
EDDSDVTTSDNAELGEEKEDLDPWIVEEMDKLLREAWQTGNEELFNQILHLISNENVSVD
YVQTETSITPLMIAAARGFINVVEHLLTLGADANLKTTNNWTAIDFARKFNRIDIEELLK
AHCSSLAFDLEKTDEEDVQLTSEEDRELLSVYQHNFDDEKVDIELVNNLIFKIHSAEGEG
AILVFLPGFDEIVCLKTAITEDRRFEHSRFVINLLHSSLQQSEXKKVFKNPPSGVRKIIL
STNIAETSITIDDVVFVIDCGKVKEKTFDALTSFTSLKSNWISKASALQRKGRAGRCQPG
KCYHLFSRPRYMHLHDFQTPEILRLPLQELCLQCKLLAPLNESVIDFLQKCPQAPPQLVI
HNAVQILKQIDAFDPFEDLTELGQHLADLPIEPRLGKMILYSVVLKCLDPVLTIVCTLSF
KEPFIIPALPSEKRSVMGKRRRFAEETYSDHMVFLRSFQAWQKAKSEGWERAFCEKNYIS
SATMEMLLGMRMQLLAQLRASGFLRARGAGDIRDLNTNSDNWALVKACLLAGTYPNLMQR
DASMALCTLNERNIRFHSSSVLQPFTSATNINTSKSLKKFVRSLPSKWIIYDEMSRFQRV
SLAKYCSLVSPTAVFLFGGPSKITTDAIVQQQQEFDEDEMSNSNKIAPNVTVKLDDWIGF
DFESELEAKLAIQFRMKWHSLFLNRMKHPSKAWSLAEEAVLQTINAVLTNAEKAIGLENP
IGVGQRPRTVESLMGTGFEDYYNRPPGNGGASGGGGYSFQQHFPQHQQHPYQHQQQQQHH
SHQQHQHYQAQQQHFYRNNNNIRSYNHLQQRNYQGYNKPVPVNTMSRESSSSTPLDSPQS
GSPSSSVSATGTTATANNSSGVEEGRYFLMRCNNQKIVDVSETKGIWATSVSNETKLNRA
FNSGKPVYLIFSVPGNANFQGYAKMTSLISKNRSPDFPGSGLTGTFSVSWVKRATIPFSN
TNFLNNPWNENRRVHTGRDGQEIEPKIGLELIKLWDTIQARRPQSSSKKKTNGPPATPGK
KQPSQKSGQKEKSYKCETPSEECGKERSDMSHSSPSPSSSTNTNHSSNSSTTSPAFGQKS
DKTSGAYSSGVAGSQFQGHQNYSNTGGKGYFPHQPGAYVQPVVGLPAGLNSVLLSQQSGH
CHSNSSGQSQQQQHYFHGTE
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaagatcctaatcgctctgagagaggccctaaattacatgaatctgtttgt
attggagaagatgtaaaaattggaattcatttggcaattcaaaggtttaggttggatcct
gattcacaagagctgagtttcccatcttcattttcaaccactgaacgtgcttatgtgcat
cgttattgttgtcagcttggcagtttaaaaacatggagcagagggaatggacaaaaccgt
tacataacagttcgtaaggtggaaggaggcagaaactccagaacattaccgtcacttttt
tctctagcccacagtgcagctcagttaaacaccttgttaaataaatatcctgttactgtt
aaagagaaacaagatctgactgttatcactgatcgaggttctaatttaaatgatagtaag
gttgttcttgttgcaggtgaaactggatcaggaaagacaactcaggttcctcagttaata
ttagatgattattgtgagagacaactgccctgtcgaatactgtgtacacagccaagaaga
atagcagcgcttagtgtttcagaaagagtggcattagagagaggagagagacttggccac
actgtaggctatcaaatcagattggacagcaagatttctcccaaaactattctaactttt
tgtactactggtgttttattaagaacttttatgggaggagatgcctgtcttagtactgtg
acccatattttagttgatgaagttcatgagagagatcgctttactgactttcttttactt
tgtttaaaagaagcattgccccgtcatcctaatcttcatttaattttgatgagtgctact
ttaaacttagatttattttctggatactttaataactgtccagtagtatgtgttgcagga
aatttgtttcaggttactgagtattttcttgaagacatacttaaatggacaggccatgtg
aataagctgatagacaaagacgtaacaaagaagcaaaaatttaagaaacaagaagagcag
ctaactgaatggtgctccaaacaactgactctgtcagacactactcctggcagtggcaca
gaagatgactctgatgtgacaacatctgataatgctgaactaggggaagaaaaagaagat
cttgatccctggattgttgaagaaatggacaaattgcttcgtgaagcttggcagactggc
aatgaagaacttttcaatcaaatcctacatttgatctcaaatgaaaatgttagcgtggac
tatgtgcagacagaaactagtattacacctctgatgatagctgcagctcgtgggttcatt
aatgttgtagagcatttacttacactaggagctgatgccaacttaaagacaaccaataac
tggacagctatagattttgccaggaaatttaacagaatcgatattgaggaacttcttaaa
gctcactgttcatctcttgcatttgacttggaaaaaactgatgaagaagatgttcagctt
acctcagaggaagacagggagctattgtctgtatatcaacataattttgatgatgagaaa
gtggatattgagttagtaaacaacctcatttttaaaattcattctgcagaaggagaaggg
gctatcttagtatttcttcctggttttgatgaaattgtatgccttaaaacagccataaca
gaagatcgacgttttgaacattcaaggttcgtaattaacttactacattcatcccttcaa
caatctgaancaaaaaaggtttttaaaaatccaccaagtggggttagaaaaattattctg
tctaccaatatagcagagacatctataactatagatgatgttgtctttgttattgattgt
gggaaagttaaagagaaaacgtttgatgcactgacttcattcacttcccttaaaagtaac
tggatctctaaagctagtgcactgcaaagaaaaggaagagcagggcgatgtcaacccggt
aagtgttaccatttgtttagcaggcccagatatatgcatctacatgactttcagacccca
gaaatacttcgacttccccttcaggaattgtgtctacagtgtaagctgttagctccactg
aatgaatctgtgatagactttctacaaaaatgtccccaggcaccacctcagttggtcata
cacaatgctgttcaaattttaaagcaaatcgatgcatttgatccatttgaagatctgaca
gagctaggtcagcatcttgctgatttgcctatagagccaagacttgggaagatgattctc
tactctgttgttttaaaatgtttagatccagtcctcactatagtctgcacactgtctttt
aaagaaccatttattattcctgccttgccgtcagaaaaaagatctgtgatgggaaaaagg
agacgatttgcagaagagacttacagtgatcacatggtttttctgagatctttccaagct
tggcaaaaagctaaatctgaaggatgggagagagcattttgtgagaaaaattatatttct
tctgcaactatggaaatgctccttggaatgagaatgcaacttcttgctcaacttagagca
tctgggtttttacgagcccgaggcgctggtgacatccgtgacttaaacactaattctgac
aattgggctttagtaaaagcatgcttgctggcaggaacctatcctaatcttatgcagaga
gatgcatccatggctttgtgcaccttaaatgaaagaaatatcaggttccatagcagttct
gtcctccagccatttacatcagctactaatataaatacgtcgaaatctctgaagaagttt
gttaggtcacttccttctaaatggattatctatgatgagatgtcacgctttcaaagggtc
tctttagccaaatattgtagcttagtgtcaccaacagctgtgtttctgtttggtggaccc
agtaagattacaacagatgccatagtccaacagcagcaagaatttgatgaagatgaaatg
tctaattcaaataagattgcacccaatgtgactgtcaagttggatgattggattggattc
gattttgaatctgaattagaagccaaattggctatacagtttcgaatgaaatggcacagt
ttgttcttaaatagaatgaagcacccgtctaaagcttggagtttagctgaagaggcagtg
cttcaaactataaatgcagtgctcacaaatgcagagaaagcgattggacttgaaaaccct
attggagttggtcagcggcctagaacagttgaatccctcatgggaactggttttgaagac
tactacaacagacctcctggtaatggtggtgcaagtggtggagggggttacagctttcag
caacatttcccacaacatcagcagcatccttaccaacaccagcaacaacaacagcaccac
agccaccagcagcaccagcactatcaagctcagcagcagcacttttacaggaacaacaat
aacatccgaagctataatcatcttcagcagcgcaattatcagggatacaacaaacccgtg
cctgtaaacaccatgtccagagaaagcagcagttcaacacctctagactcaccacagtca
ggctcaccctcttcatctgtctctgccactggaaccactgcaacagctaataacagctct
ggtgttgaagagggcaggtactttttgatgaggtgcaataatcaaaagattgtggatgtt
tctgagactaaaggcatctgggccacatctgtttctaatgaaacaaagctaaacagagcg
ttcaatagtgggaaaccagtatacttgatattttctgtccctggcaatgcaaactttcaa
ggttatgccaagatgacttcgcttattagcaagaataggtcaccagattttcctggctct
ggtttaactggtacatttagtgtatcttgggtcaagagggccaccataccattcagtaat
acaaacttcttaaataacccatggaatgaaaataggcgagttcatactggccgtgatgga
caggagattgagcctaaaattggcttagaactaataaaactgtgggacaccatccaagcc
agacgtccacaaagcagctcaaagaagaaaaccaatgggccacctgcaacaccaggtaaa
aagcagcctagccagaaatctggtcaaaaagaaaagtcgtacaaatgtgagacgccaagt
gaagagtgtgggaaggaaagaagtgatatgtctcactccagccccagcccctcctcatca
actaataccaatcacagttctaacagtagcaccaccagccctgcttttggccagaagtcg
gataaaaccagcggtgcttattcatcaggtgtggcaggatcacaatttcaaggccaccag
aattactccaacactgggggcaaaggttattttcctcatcagccaggtgcttatgtccag
cctgtggttggtctgccagcaggtttgaactcagttttgttgtctcagcagtcaggacat
tgtcacagcaacagttcaggtcaatcccagcagcaacaacactattttcatggtactgag
taa
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integrated database retrieval system
