Biomphalaria glabrata (bloodfluke planorb): 106075124
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Entry
106075124 CDS
T07368
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106075124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106075124
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
106075124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_14
TPR_16
TPR_17
TPR_8
TPR_12
TPR_11
TPR_CcmH_CycH
ANAPC3
TPR_7
ARM_TT21_5th
TPR_9
ARM_TT21
ChAPs
TPR_10
ARM_TT21_C
TPR_20
TPR_15
SNAP
Sel1
Peptidase_M17_N
BTAD
Motif
Other DBs
NCBI-GeneID:
106075124
NCBI-ProteinID:
XP_013091494
UniProt:
A0A2C9LHE9
LinkDB
All DBs
AA seq
1552 aa
AA seq
DB search
MDTIEIKACLKKARDALREKDFKEALKQSKAVLGVDKDNYNALVFIGLAAEGLIQPDQAL
KAFRRASEKDPDQLLAWQGLSSFFDKNPTVVGTDEAIIIYQRLLALTLSDCKKQIVYAQK
LVDLYLKSNKKEKALELLEHLLDLHKAVEERVTVLKQIINTWSHDLPHSTSNLYQSALTE
ILQHTAYLTKDEISTFIEQLLCQMSKVSVDSVKTLCTTFNENFPDAFPPKEYLLRFYLET
NIGVATVPMTICEQVAQLIEQLISIKPDSLMIQVAQGFLELQRNNFVKANNLLQVCDADN
ISGLYYLGFTNLRLHKYQQCLEVCNKGLTALSSPSRVFSSSLAHVDCLFKLAMAEAYREI
NTLDSREKAFSILEEVSERMPNEAFLIKAYVYLDQGKVDDAQTCANYLPQDSLPVQTLKA
TILFAKKDFMSALEILKKIVAEDPSDFRTTLKLGQTLWELRNSQDIADVKEQCFNTLLKA
AKLDPFHFESFLYLGYFYRDIQRDKTKARRCFQKAYDLNSASTETGIALVDSLMEQEEQT
QCVRILEQATSQAAAGHAKWAWLRLGLYQIKQNDFDAAIISLQSALRGDPDDNHVWECLA
EAYLQRGSYNAALKAFTKASELDPNSLYCQYKIANIKHVLGEMAMAIIEYKKILEKSPDY
VPVLKGVSESLIQLGKHKLLACLDDLAKGCFEEAIVFLTRAAAQRPDLSCIWKLLGDACT
LIYPIDVEPFSVPVKLLKKTTSVEELKLVTKSELLRIGSSCYGQALKIFPESGSLWHDLG
VNLYHQSQLLFSNDDSGDGLTLLDRASQALKKAINLEPKDWRHWNVLGVIACCSACDKPS
LAQHCFIKSLECEANNVVAWTNLGTFYLSKNNVELAYNAFKNAQSIDPTYVACWIGQAMI
AETVQSNEAMDLFRHSSELGFNLESSLGYSQWVLKVLGDASVRKTEVYHYSIQQMAAVPA
ASDDMTRYTRRIKKDPVAYNMQGLLFEHQNLLDSSVSAFQKAISLLKQGFRDDSESYLND
VQINLARVLSKQGKYEESIQLYETCSMTSDVQNTCFYGLTLFKAGRIKDAFNVYSQVLTV
VPGMPEESQVYAALGMVAYKTGDISQAKTLLFSGFQTSQPSLHGLLALCALGLLQKDMTL
SAAVLEELYKREDKEEVLKEISLLKLYSNYLQDSFEEGLIKLKQVCETTPVLTSLLGQCL
LSSWTKLTKSEILHSILQFLCLRDGRQENDPQFDLVQTLSQLLVGQHHRKSNDQNVLKTA
QKAFHANPGCYLALSNLAAAVHAEAVVMKNSKCSNLFQVEQGLLNILLEDNRITPELRSW
CLQMFVVNCIERKDIDSAQMYLKRFQEGHTLSTVEEMFYKSITSYLTRKINPLHEISDSR
ILSRLQLLVDCELCCHHNDYQTAVNMLDRLIQQTETQNCCSDSILHNLKERLAYIAFCGL
KDQPESLNFKKKFEEILTDMKDSPILLIMDAYRALAANDNRKAKFLFATALDKVSANKDV
GFCSSLARQWLLKLSWGSTKEQDQNLIQNILQDAKSRGDSKTVEMFQSLSAK
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggataccattgaaataaaagcatgtcttaaaaaagccagagatgctcttcgagaaaaa
gattttaaagaggctctgaaacagagtaaggctgtccttggagtggacaaagataattat
aatgccttagtatttattggacttgcagcagaaggactgattcagccagatcaggcatta
aaagcttttagaagagcttcagaaaaagacccagatcaacttcttgcttggcagggattg
tccagtttctttgataaaaatcctactgtagttggcacagatgaagctatcattatttat
caaagacttttggctttaactttaagcgattgcaaaaaacagatagtttatgcacagaaa
ctagtggacttgtatttgaaatctaataaaaaagaaaaggcactggaactgctggagcat
cttttagatcttcataaggctgtggaagaaagagtgactgtacttaaacaaattatcaac
acatggtcacatgacttgcctcacagtacatcaaatttgtatcagtcagctttaactgaa
attcttcaacacactgcatatttaaccaaagatgaaatcagtacttttattgagcaactt
ctctgtcagatgtcaaaggtttctgtggattcagtgaaaactctgtgcacaacattcaat
gaaaatttcccagatgccttcccaccaaaagaatatctgctcagattttatttagaaaca
aatattggtgttgccacagttcctatgactatatgtgaacaagtggctcaacttattgag
cagctcatcagcatcaaaccagactctctaatgatacaagttgctcaaggctttttagaa
ttgcagcgcaacaattttgttaaagcaaataatcttttgcaagtttgtgatgctgataat
attagtggactctactatttaggctttacaaatcttcgtttacacaaataccaacaatgc
ttggaggtttgtaataaaggattgacagccttgtccagtcccagcagagtgtttagttca
tcgctggctcatgtagactgcttgtttaaattggccatggctgaagcctacagagaaatc
aatacacttgactctagagagaaagctttttcaattttagaagaggtttcagaaagaatg
cccaatgaagcctttctcatcaaggcctatgtgtatttagaccagggaaaggtggatgac
gctcagacctgtgctaattatttgcctcaagattctctgccagtacagactttaaaagcc
acaattttatttgccaaaaaggacttcatgtcagctctagaaatactgaagaaaattgta
gcagaagatccctctgactttagaaccacattaaaactaggtcaaactctgtgggagcta
agaaactctcaggatatagcagatgtgaaagagcaatgttttaatactcttcttaaggct
gccaaacttgatccttttcattttgaaagttttctgtacttgggctacttctatagagac
attcaacgtgacaaaactaaagctagaagatgttttcaaaaagcctatgatctgaattct
gcttctactgagacaggaatcgctttagtagattcattgatggaacaagaagagcaaact
cagtgtgttaggattctagaacaagctacttcccaagcagccgcaggacatgccaaatgg
gcttggttaaggctaggattgtaccagatcaagcaaaatgactttgatgctgccattatc
tcactgcagtctgccctcagaggagatcctgatgataaccatgtttgggaatgcttagca
gaagcttatctccagcgaggtagttacaatgctgcattaaaagcatttactaaagcatct
gagttagatccaaactctttgtattgtcaatataagattgctaacatcaaacatgtactt
ggagaaatggcaatggctattatagagtataagaaaattttagaaaaatctccagattac
gttcctgtcttaaaaggtgtttctgaaagtcttatacaacttggtaaacacaaacttctt
gcctgtttggatgatctagccaaaggatgttttgaagaggctattgtctttttaactaga
gctgctgcccaaagaccagatttgtcttgcatttggaagttgctgggcgatgcttgtact
ctgatttacccaatagatgtggagccatttagtgtgcctgtgaaactgttaaagaaaaca
acaagtgttgaagagttaaagctggttactaaaagtgaattgctcagaataggctctagt
tgttatggtcaagcattgaaaatatttcctgaaagtggctcattgtggcatgaccttgga
gtaaacttgtaccatcaaagtcagcttttattcagcaatgatgacagtggagatggtctc
acactgttagacagagccagccaggctctgaagaaggcaattaatctagagcccaaagac
tggcggcactggaatgtcctgggagtcattgcctgctgcagtgcctgtgacaagccatct
ttagctcagcattgttttatcaagtctctagaatgtgaagcaaataatgttgtggcctgg
acaaatcttggaacattttatctcagtaaaaataatgttgagcttgcttacaatgctttt
aaaaatgcccagagtattgacccaacatatgtggcttgttggattggccaggcaatgatt
gctgaaacagttcaatcaaatgaggcaatggatttatttcgacactcttcagagcttgga
ttcaatttggagagcagtctaggatacagtcagtgggtattgaaagttctaggggatgcc
agtgttagaaaaactgaagtctaccattacagtatccagcagatggcagcagtaccagca
gctagtgatgacatgacaagatatacacgtcgtataaagaaagatccagttgcttacaat
atgcagggcttgctgtttgaacatcaaaacttgctagattcttctgtatcagcatttcag
aaagctataagcttattgaaacaaggattcagggatgattcagagagttatttaaatgat
gttcaaatcaatctagccagagtacttagtaagcaaggaaaatatgaagagtctattcag
ctctatgagacatgttccatgacttcagatgtacagaatacatgcttctatgggctgaca
cttttcaaggctggtagaataaaagatgcttttaatgtgtatagtcaagtcctgactgta
gttcctggtatgccagaagagtctcaggtgtatgcagctctaggtatggtagcctacaag
actggagacataagccaagcaaagactcttctctttagcggcttccaaacatctcaacct
tcacttcatggcttgttggctctgtgtgccctgggacttttacagaaagacatgactttg
tctgctgctgtacttgaagagctctacaaaagagaagataaagaggaagtcctgaaggag
atcagtttgttgaaactctactcaaactatttacaggacagtttcgaggaaggtttaatt
aaattgaaacaagtgtgtgagacaacaccagttctaacaagtctcttaggacaatgtctt
cttagttcttggaccaaattaaccaagtcagaaatcttgcattcaattctacagtttctg
tgtcttcgtgatggccgacaagaaaatgacccacagtttgatttagtacaaacactaagt
caactattagttggacaacatcacaggaagtccaatgatcagaatgtcttgaaaactgca
caaaaagcattccatgctaatccaggttgttatctagcattaagcaatttggcagcagca
gttcatgcagaggctgttgtcatgaaaaactcaaagtgtagcaatttgtttcaagtggag
caaggtctcctaaacatactgcttgaggataataggataactccagaacttaggtcttgg
tgtctgcaaatgtttgttgtcaactgcattgagaggaaagatattgactcggcacaaatg
tatttgaaaagatttcaagagggacatacattatcaacagttgaagaaatgttttacaag
tctataacatcttatttgacaagaaaaattaatcctttgcatgaaatttctgacagtaga
atactttcaagacttcaacttctggttgattgtgaattgtgttgccatcacaatgactac
cagactgccgtcaacatgttagatagattaattcaacaaactgaaacacaaaactgctgt
tctgatagcatcctacacaatttgaaagagagacttgcctatatagctttctgtggcttg
aaggaccagccagaatctcttaactttaagaagaaatttgaagaaatactaactgatatg
aaggactctccaattcttttaatcatggatgcctatagagctttagctgcaaatgataac
aggaaagctaaattcttgtttgctacagcactagacaaagtcagtgccaataaagatgtt
ggattctgtagttcactggctagacaatggttgctaaaactttcttggggatcaacaaaa
gaacaagaccaaaatctgattcaaaatatattacaagatgccaagtctagaggagactct
aaaactgtggaaatgtttcagtcattatcagctaaataa
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integrated database retrieval system
