Biomphalaria glabrata (bloodfluke planorb): 106076215
Help
Entry
106076215 CDS
T07368
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03440
Homologous recombination
bgt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106076215
03450 Non-homologous end-joining
106076215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgt03032
]
106076215
03400 DNA repair and recombination proteins [BR:
bgt03400
]
106076215
DNA replication proteins [BR:
bgt03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106076215
DNA repair and recombination proteins [BR:
bgt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106076215
BRCA1-C complex
106076215
NHEJ (non-homologous end-joining)
MRX complex
106076215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_29
AAA_16
AAA_5
ABC_tran
AAA_13
Motif
Other DBs
NCBI-GeneID:
106076215
NCBI-ProteinID:
XP_013092532
UniProt:
A0A9W3B4W9
A0A2C9JC49
LinkDB
All DBs
AA seq
1320 aa
AA seq
DB search
MSTLERMGIQGIRSFGPDEVDFQSLKFFTPLTLILGPNGTGKTTIIECLKYATTGDMPPG
CKGAGAAFIHDPKLCKEREIKGQIRLMIQDVSGAKLMVTRSMNSKLKDSTGKKIEMKTLD
GVLTRSLPDGEKQSITSRCADLNIEMIGALGVSKAVLENVIFCHQEDSNWPLGEGKTVKE
KFDAIFASTRYTKVLDEIKKLKQAQDQEIKEGKKELEYLKQLKTKAEELRNSLDDIESKF
AASVDSVEKINGELEPVRAELLKINTHQNEIFKLQTSKQKFVSEKEHIEKSMKDLKEKIK
ENFTGPTTELKKELRDFSEKVQEKKDELSEQENQQDRLVSELDKLAKTKSNVLMEKGKLE
KEAEINAENIKKRDAKIFEVAAMYDFEGFSKGQEISDELYQRFFEFVKEKLTSLMELGKR
KKAEFEEKENRIQEKIDALKENKTKLEHGEKMHKDTIAKNEIEIKDINRKLTKMITSADR
LESLKSDLNRVENQLHEVEASLNVDDARAEIASLDKQKKLLDASISELNTEINRLTKQSA
VQTQLDMLISNQQEKESTIERLRQLHEDSIVSLLGHIPLDNLREAVSDYISNQTETVKKI
NLELNKQKTLLSSKQAEKNSLGTQLRQKEDELRTLEDKIYNVCESQDLDEEFNEVQKNLT
QAQEEKGSLLGADHMIKKYIRNLEKNNPCCPLCTRGFQQAQEVRELILKLQEQLRKVPIN
IKKADEDVEKYQQKYDAIMQLKPLKEKSVSLKEIDIPELKSKIKKLDDELKSIKDIIQTK
EDEVSIQETDLQIAKGFHPDIIDMDRRRGEVRELERKIEAQRALLLGGGSNRQIEQVMKE
REEKQLELDTMNRTLDSRRDKLSDFQEQTQKLRSKVHSLQSEKLGLEGELQQKIKLEERK
TTLASDNKNYQRDIDEAKSQIRPIDSQIQKLLEEKGEVTNSKDKMMENARADVETVKNKG
TSVKNLNTEIKNYNQSGKLDKLKVCLKKEKELDAEKLKKGELLEELSVAVKKITNEISNQ
QIRERELQDILLLRNKEEEVKSLEVKIAELQTKLGGLDVKTLEKDRQALLRKETELNQKQ
STALGRQQGFKDQIKSVKNDLNSDMYKEAEKKYKTKVIEIKTTEIVNMDLQKYYSALDKA
IMMYHKAKMEEINVIIQELWKNTYRGNDIETILIQSEVDETTAGAMKNRRTYNYRVVMRR
NGIDLDMRGRCSAGQKVLASIVIRLALAETFCTNCGILALDEPTTNLDRANIESLAIALV
SVIKERQSQRHFQLIIITHDEDFVELLGRSEYVDEYIQVSKNPDGFSRLKVKRVEELHSS
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgtctactttagaaagaatggggattcagggcatccgcagttttggtccagatgaagtt
gactttcagtcacttaaattttttacaccattgactctgattcttgggcctaatggcacg
ggcaaaactactataattgagtgcttgaaatatgccacaactggagatatgccaccagga
tgtaaaggtgctggagcagctttcatacatgatcccaaattatgcaaagagagagagatc
aaaggtcagatccgattgatgattcaagatgtttctggcgctaagctaatggtcacgagg
tctatgaattccaagcttaaagacagcacaggcaaaaaaattgaaatgaaaacgctggat
ggtgttttaacaaggtccttacctgatggagaaaaacaatccattacctcacgttgtgct
gatttaaatattgaaatgattggagccctgggtgtgtcaaaagcagtcttagagaatgtg
atattttgtcatcaggaagactctaattggccactaggtgaagggaaaactgtcaaagaa
aagtttgatgccatttttgcttcaacaagatatactaaagtattggatgaaataaaaaaa
ttgaagcaagctcaggaccaagagatcaaagagggtaaaaaagaactggaatatttaaaa
caactcaaaacaaaggcagaagagctacgaaattctttagatgatattgagtcaaaattt
gctgcttcagtggacagtgttgaaaaaattaatggagagctagaacctgtcagagctgag
ttactaaagattaatactcatcaaaatgaaatttttaaacttcagacatccaagcaaaaa
tttgtcagtgaaaaggaacacattgagaaaagtatgaaagatttaaaagaaaagataaag
gaaaattttactggccctactacagaactgaagaaagaactgagagatttctctgagaaa
gttcaagaaaagaaagatgaactttcagagcaagaaaaccaacaagatagactagttagt
gaactagacaagttggctaaaaccaaaagcaatgtcctgatggagaaagggaagctggag
aaggaagcagagataaatgcagaaaatataaaaaaaagagatgccaagatttttgaggta
gcagccatgtatgactttgaaggttttagtaaaggtcaagaaatcagtgatgaactgtac
cagagattttttgaatttgttaaggaaaagttgacttctctgatggagcttggaaaaaga
aaaaaagctgaatttgaggagaaagaaaatcgaattcaggagaagatagatgctttaaaa
gagaataaaactaaattggaacatggagagaaaatgcataaagacactatagccaaaaat
gaaatagaaatcaaagacattaataggaaactcacaaagatgattacatctgctgaccga
cttgaaagtctaaaatcagatctaaatcgtgtagagaatcagctgcatgaagttgaagcg
tctttaaatgtagatgatgctagggcagaaatagcctcccttgataaacaaaagaaacta
ctggatgcttcgataagtgaactgaacactgagataaaccgtctcactaaacagtcagct
gttcagacacagctagatatgctgatatctaatcaacaggaaaaggaatctaccattgag
agattaagacagctccatgaggatagtatagtcagtctcttgggacacattcctttggat
aatcttagagaagctgtcagtgattacataagcaatcaaacagaaactgtcaagaaaatc
aacctggagctaaacaaacagaaaactctgctatcttccaagcaggctgagaaaaactct
ctaggaacacagttgcgtcagaaggaagatgagctgcgaacattagaagataagatttac
aatgtttgtgaaagtcaagatttggatgaggaatttaatgaggtccagaaaaatctgact
caagcacaggaagaaaaaggttcccttcttggagcagatcacatgatcaaaaaatatatc
agaaacttggagaaaaacaatccttgttgccctctgtgcactagaggcttccaacaagct
caggaagtcagggaactgatactgaagctccaagaacaactccgcaaagttcccatcaat
atcaagaaagctgacgaagacgtagagaagtaccaacaaaaatatgatgctatcatgcag
ttgaaacctttgaaagaaaagtctgtcagtttgaaggaaatcgacattcctgaactcaag
tcaaaaatcaaaaagttagatgatgaattgaagagtattaaggatattatccaaactaaa
gaggacgaggtcagcatacaagaaactgacttgcagatagccaaaggttttcatcctgac
attattgacatggacagacgaaggggagaagttagagaactggagagaaaaatagaagcc
caaagagctcttttgctaggtgggggctctaaccgtcagattgagcaagttatgaaagaa
agagaagagaaacagcttgagctggataccatgaaccgtacgctggacagccgtagagat
aaacttagtgatttccaggagcaaactcagaaactaagaagtaaagtgcatagcttacag
tcagagaaactaggcctcgaaggggaactgcagcagaaaataaaactagaggagcgaaag
accaccttagcaagtgacaataaaaactatcaacgagacatagatgaagccaaatctcag
atcaggccaatagatagccagattcaaaaattacttgaggagaaaggggaggtaactaac
agtaaagacaagatgatggaaaatgccagggcagatgtggagactgtgaagaacaaaggg
acatctgtgaaaaatttgaacacagagatcaagaactacaaccagtctggaaagctagac
aagctgaaggtttgccttaaaaaagagaaagaactagatgcagagaagctgaagaaagga
gagttactagaagagctgagtgtcgctgtgaagaagatcaccaatgaaatcagcaaccag
caaataagagagagggagctgcaggacattttgcttctacggaacaaagaagaagaggtg
aaaagcttggaggttaagatcgcagagctgcagactaagcttggagggctggatgttaag
acgctagaaaaagacaggcaggctctgctaagaaaggagacagaactcaaccagaagcaa
agcacagcccttggaaggcagcaaggttttaaagatcaaatcaagtctgtgaaaaacgat
ttaaactctgacatgtacaaggaagctgaaaagaaatacaaaactaaagttattgagatc
aaaacaacagaaattgtaaacatggacctacagaaatattactctgcattggataaagca
atcatgatgtatcacaaagcaaaaatggaagaaattaatgtcattatacaagagctgtgg
aaaaatacctacagaggcaatgatatcgaaactattctaatccagtctgaggtggatgaa
acaacagctggtgcaatgaagaacagacgtacttataactatagagttgtcatgagaaga
aatggcattgacttggacatgaggggcaggtgtagtgctggtcagaaggtcctggcctct
atcgtcattcgcctagctctagcagaaacattctgcactaactgtggtattctagcactg
gatgagccaaccactaacttggatagggccaacattgagtccctggccattgctttagtc
agtgtgatcaaagaacgtcaaagccagaggcattttcagttgataattataactcatgat
gaagatttcgtggagcttcttggcagatctgaatatgtagatgaatatatacaagtcagc
aaaaatcctgatggtttctcaagattaaaagtgaagagagttgaagaactgcactctagt
tag
DBGET
integrated database retrieval system
