Biomphalaria glabrata (bloodfluke planorb): 106076311
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Entry
106076311 CDS
T07368
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106076311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106076311
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106076311
mRNA cycle factors
Common to processing body (P body) and stress granule
106076311
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
TPR_8
YodL
Motif
Other DBs
NCBI-GeneID:
106076311
NCBI-ProteinID:
XP_013092617
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MSSSAAAQMMRQADAVKNTMTESGKAFSDLWVTRQKLEDLYKKMLLLDLEYALDKKVEQE
LWNHAFKNQINTLQSQAKDRQNPKKVEAQASLNLFLETASGFYLQFLQMICSTFKLDLPF
RRKSAAFGIMRENTMNYKTIVTPKKSSCLYICCHCLVHLGDLARYRQQTEQAQTYYRHAA
NLSPNNGQPYNQLAILEASRGDKLSTVFYYVRSLAVRHPFPVAATNLEKFYSKLIKDTRS
DFDGPNLTMSEVITAFMHFQALLHMSTGLDRASNLKTKIVVGLGNHIRGQSVSAAHLTGI
VAISIFALHRARFDTSESGESVKKTLLSSEEEKIVQIHLSFIVKLLETLLQHTPKEDGKA
RDFPTLSAIKVLFDWLYLNKDLLQGREFNNTSIWSDLCKLLNTLQWLLNENNKASDFTKY
EDTPLPEDTDLRCFQPLEPTYSNFNFNKALNEDLSGACERDLRCQRLLAHGKWLAQDLPK
LKLVIYQPTKSIRTQFSTQKVAQNTDSPTLPSQKSSQRQNVAMQTIMKKQMQKRMEQTKS
STSTSPLSVISEEGKYATPDTTPRATPSEVGQDAVHQSTNQKQASGTRQAGVINIHHKGS
NQKNLPPRLSAKVAGAHNSNLSPRLQKKLAPNTARNANNAVVMQSNKTEILDANKDGSKD
ALSFIEQDSYPSLNIDNYPALPSQRNPASLIPVDGASSQKNFLASPQWGVLNLGRDSTST
STTNPLLAMGNSASSPSLDSTSESTHSPQPSPRMISPFSVPDQNIRPMEQSMLDQGMSGL
SADFLSAIRSASQIIQQQQQQQSFHAMQQLQQNLDPQSQFQRPPYLNQQQSNQGMRNPLN
FFSNQPSMNPNNSLYKQTASNPVPANNAQNLGQNANPYSSSLNQSLKMNSQSSLGNLNIP
PPQRGPPSLMLDSRQASTSPVRGYQASRVDTSSEPYMTNSSVSLAPVGFIPPTAVGPASK
TQPTGLGNPNFNSSLMSGVPVGAGRAANTSQQHSFLGGGAGSSHLNSQNYVPQQMSTMKP
QQSGVLYKNIPLPGTAINGMGGSNNLASLFMSGQNLSQGQSHGSLQQQGYNRGGQPSNSN
LMQDSRLSSSFLGHAAGTPKPEKQNATPQFNPQQHPMKQATNNQQSMIRAVMDPPFLQAS
GEYTLFSNNNMPGWPTSLVKTTPNQIMKGAPGKGSGSSGLMSSNQMMSSAGHSETGTNLQ
GLWSNTGPSPLERLLEQQRGQRQTDG
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcagcggcagcacagatgatgaggcaagcagacgctgtaaagaatacaatg
acagaatctggcaaagcattttctgatctttgggtgactagacaaaaattagaagatctg
tacaagaagatgctgctgctggatttggaatatgcccttgacaagaaggtggaacaagaa
ttgtggaatcatgcatttaagaaccagatcaatacactgcaatcacaagctaaagataga
cagaatcccaaaaaggtagaggcccaagccagcttgaatctttttcttgaaacagccagt
ggtttttacttgcagtttcttcaaatgatttgctctaccttcaaattggatcttcccttc
aggcgcaaatctgctgcatttggtattatgcgagagaacacaatgaactacaaaacaatt
gtcactcccaaaaagagttcctgtctttatatttgttgtcactgcttagttcatctggga
gatctcgcacgttatcgtcagcagacagaacaggcccagacctactacagacatgctgct
aatctttctccaaataatggccaaccttacaatcagttagccatcttggaagcctcaagg
ggagataagctgtccactgtgttttattatgtgcgcagtcttgctgtcagacatcctttt
cctgtggcagcaacaaatttagaaaaattctattctaagctcataaaagacacgcgttca
gactttgatggtcctaatttgacaatgagtgaagtcattactgcctttatgcacttccag
gctttattgcacatgtccacaggtctagatagagcttcaaacttaaagacaaaaattgtg
gttggtctgggaaatcacatccgagggcagagtgtctctgctgctcacttaactggcatt
gtggctatttccatctttgccctccatagagctaggtttgacacaagtgaatctggagaa
tctgtgaagaaaactttgctgtctagtgaagaggaaaaaattgtacaaatacatcttagt
tttattgtcaaacttttggaaacactgcttcaacacacacccaaggaagatggcaaagca
agggattttcccacactgtcagctatcaaagtgttatttgattggttgtatctgaataaa
gatcttttacaaggaagagagttcaataacacaagcatttggtcagatttgtgtaaacta
ttgaacacattgcagtggttgctgaatgaaaacaacaaagcttcagatttcactaaatat
gaggatacaccattaccagaagatacagatctgagatgttttcaaccattggaacctacg
tacagcaatttcaacttcaacaaagccctgaatgaagacctgagtggggcttgtgagagg
gatctccgctgtcagcgacttttagctcatggcaagtggttggctcaagatctccccaaa
cttaagttggtcatctaccaaccaaccaagtctatcagaactcagttttccacacagaaa
gttgcacagaacactgatagtccaacccttccttcccaaaagtcatctcagcgacaaaat
gtggcaatgcagactatcatgaagaaacagatgcagaaaagaatggaacaaactaaaagc
tcaacaagtactagtcctctatctgtgatatcagaggagggtaaatatgcaacaccagat
actacccccagggctactccatcagaagtaggtcaagatgctgtacatcagtccaccaat
cagaagcaagcctctggcactagacaggctggagttattaacatacatcacaaaggcagt
aaccagaagaacttgcctcccagactgtcagctaaagtcgcaggagcacacaattcaaat
ctgagtccaagacttcaaaagaagttagctcccaacacagcaagaaatgcaaataatgct
gttgtcatgcagtcaaataaaactgaaattttagatgccaataaagacggcagtaaagat
gcactgtcattcatagaacaagattcctatcccagtcttaatatagataactaccctgca
ttacctagccagagaaaccctgcatcattgatacctgtagatggtgcttccagccaaaag
aactttcttgccagccctcagtggggagtgttaaatcttggcagggattctacaagcact
tctacaaccaatccactcttggcaatgggaaacagtgcctcttccccatcccttgacagc
acatcagagtcaacccattctccccaaccctcaccaaggatgatttcacccttctcagtt
ccagaccagaacataaggccaatggagcagtccatgctggatcagggtatgtcaggcctg
agtgctgactttctgtcagctattaggtcagcgagccagatcattcagcagcaacaacag
caacaaagttttcatgccatgcaacagcttcagcaaaatttggatccgcagtcacagttt
cagcgaccaccatacctaaaccagcagcagtctaaccaagggatgagaaatcctctgaac
tttttctctaatcaaccatctatgaaccctaacaacagtttatataaacagactgccagt
aatcctgttcctgcaaacaatgcccaaaacttaggccagaatgctaatccatattcatct
agtttaaaccaaagtctcaagatgaattcacaatcctcattgggaaatttgaatatccca
ccaccacaaaggggccctccatcattgatgcttgactccagacaagccagtacatcccct
gtcagaggttatcaggcttctagagtggacacttcttcagaaccgtatatgactaactca
tcagtgtccttggctccagttggatttattcccccaacagctgtggggcctgcaagcaaa
actcagccaactggactaggtaatcctaacttcaactcttcacttatgtctggtgtacct
gttggggctggaagagctgctaatactagtcagcagcattcatttctaggaggaggagca
ggaagttcccatctgaacagccagaactatgttcctcagcagatgtctaccatgaagccc
caacagtctggtgtgttgtataaaaacatcccactgcctggtactgctattaatggaatg
ggtggctctaacaatttagcaagtctcttcatgtccggacaaaatttatcacaaggtcag
tcccatggttcactacaacagcaaggctacaatagaggaggacaacccagtaacagtaat
ctaatgcaagactcaaggctttccagtagttttcttggccatgctgctggaacacctaaa
cctgaaaaacagaatgcaactccacaatttaatcctcagcaacacccaatgaaacaagcc
actaacaatcagcagtcaatgatacgtgctgtgatggatccaccatttctgcaggccagt
ggggagtacactttgtttagcaataacaacatgccaggatggcccacatcactggtcaag
acaacacctaaccagataatgaagggagcaccagggaaaggctcaggttctagtggtcta
atgtcttcaaatcagatgatgtctagtgctggccattctgaaactggaactaatttacag
ggtttatggtctaacactggaccatctcctctagaaagactcctagaacaacagcgaggt
cagagacaaactgatggctga
DBGET
integrated database retrieval system
