Burkholderia glumae LMG 2196 = ATCC 33617: KS03_1305
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Entry
KS03_1305 CDS
T03820
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgu03400
]
KS03_1305
Enzymes [BR:
bgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS03_1305
DNA repair and recombination proteins [BR:
bgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
KS03_1305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HTH_61
DEXQc_Suv3
AAA_16
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AJY66125
LinkDB
All DBs
Position
I:complement(1407371..1410268)
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AA seq
965 aa
AA seq
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MKYELPDEHGLSDQTVEKLVFKEGDDYSLTDAQFSALKAGVGRGESVLVVSPTSTGKTQI
AIWAIANGLEKNCRTVYLLTHRALAKQKFDDFRSTLIDSHLNGDLTSLVIATGDSIEAAD
GSIPRNPLQAPLVVATYEKYLALLSASGVPTDMRSTVVVCDEIQLIGDENRGQNVEVLLT
LMRNAGWRQFVGLSAVLETRDAQELAQWLGVSLVMEMRREKQLRYECWANDGIHSVATGA
PDNIVRTAHAAGVRLDIASVLKTLLGQTPAPSPIIVFCSSRKQTYELADNHYTALSGGAT
GQLSLAFDALPATSATSLLAKYLPHRFAVHSADLTEEEREVIESHLSEGKLDVVFATTTL
AAGVNFPLGAAIISWERWNSDKRMYEPIPASEFHNMAGRVGRMGFEHDYGRVVYIADREQ
KARASSHYLDLGSLPPLTSRINPTRFDQLALQLVASGLCTSRSEVDTLVKSTLSGLREQD
RNTSAFEKWSPILNESVNFLVNERLLIESTLGRLVATQLGKAIAHSGLLPETGIVVAQHL
ARHAAALSNYLPTHLNTGDPNRLAFLSIAMCFSSPEFRGGRREKRTRFLPYQLGSGMLID
ADSYSSELIEPTWQADPDPINATKITLDWINGATLRDLENLFLTLSAGQLREMFGNVSWI
LQGVAAIIEAATDIRTSGATRPSYLSIPDGDLANLRKLPRYLRRLAIRISEGLPDDVIWM
TWLNMRGADFSLTRTEILSLRLRGFTSLDQLMLGEPQADKIRIQAFEKARPSPQAKANWL
RDTAREWKKQQRQRTAERHAVRAKKCPHSQHVNAYYSARGTAFETAFESVLSLLKIDFQR
LDDKGITGAPDYLLRLSGSPDIIVELKSKTNDKLVDYNSAVEVLAASEVHGYKGTFCVTL
CHPGVDPSVPSVINSCGRLSVVESHDLGEALLRICEGNLTQDQLWQWLATPGQAKAEDLP
FKSYS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgaactgccggatgaacacgggttatcggatcaaacagtagaaaaactcgta
ttcaaagaaggggacgattattcgcttacagatgctcagttttcagcgctgaaggcggga
gtgggtcgaggggagagtgtacttgtcgtttcgccaacatctacaggaaaaacccaaatt
gccatatgggcgatcgcgaatggccttgagaaaaattgtcggaccgtttatttattgacg
catcgggcgctggccaaacaaaaatttgacgattttcgttcgacattaattgatagccat
ctcaacggcgatttgacatcgctagtcattgcaacgggagattctatcgaagcggccgat
gggagcattccccgtaaccctctccaagcacctctcgttgttgccacttacgaaaaatat
ctggcgttgctatctgcaagtggcgtcccaaccgacatgcgatcaacggtggttgtatgt
gacgagattcaacttattggggacgaaaatcgcggccaaaacgttgaagtccttctgact
cttatgcgcaatgccgggtggcggcagttcgttggcctctctgctgtcctggaaacccga
gatgcgcaggagcttgcgcaatggctcggtgtctcgcttgttatggagatgcggcgcgaa
aaacaattacgttacgaatgctgggccaatgatggcattcattctgttgcaacaggggca
cctgacaatattgttcgtacggcgcacgctgccggggtgcggctcgatatagcaagcgtt
ctaaaaaccttactgggccaaacgcccgcaccaagcccaattatagttttctgctctagc
cgaaagcaaacgtacgaactagcagacaaccattacactgcgctctcaggaggggcgacc
ggtcagctgtcgcttgcatttgacgctttgccggcaacgtcagcgacttctctcttggca
aaatatttaccgcatcgattcgctgttcacagcgctgacctcacggaagaagagcgtgag
gttatcgagagtcacttatccgaaggaaagctcgatgtcgtattcgcaacgacgacttta
gcggcaggcgtcaactttccgttgggggccgccattatttcgtgggagcgctggaacagt
gataagagaatgtatgagccgattccggcgtcagagtttcacaacatggccggtcgagtc
gggcgaatgggatttgagcacgattatggtcgagtagtttacatagcggatcgcgagcaa
aaggccagggcatccagtcattatctagaccttggcagcttaccgccactaacatcaaga
attaatccaacccgctttgatcaacttgcattgcaactcgttgcctcaggactatgcacc
tcgcgatccgaggtagacactcttgtcaaatcaacattaagtggtcttcgagaacaagat
cggaacacgagtgcatttgagaaatggtcgccgatactaaatgaatcggtaaactttctc
gtaaacgagcgcttgctaattgaatcaacactgggacgcctcgttgccacgcaactgggc
aaagcgatcgcgcattccggcctactaccagagaccggcattgtcgtcgcacaacatctg
gcgaggcatgccgcagcgctgtcaaattatttgccgacccatcttaataccggcgaccct
aacaggctcgcctttttatctatcgcgatgtgctttagttcaccggagttcagaggtggc
agacgcgaaaagaggacgagatttttgccatatcaactaggaagcggaatgctgatagac
gccgactcttatagctcggagctaattgagccgacttggcaagccgatccagatccaatt
aatgcgacaaaaatcacgcttgactggataaacggcgcgaccctcagggatttggaaaat
ctcttcctaacattgagtgccgggcagctacgggaaatgttcggaaatgtctcctggatc
ttacaaggagtagccgcaataatagaggcagcgactgatattagaacgagcggcgccact
cgcccctcttatttatccatcccggatggcgatctcgcaaacttgagaaagcttccccga
tatttgcgacgactagcgattcgaatttcggaaggcttgcccgacgatgtaatatggatg
acttggcttaatatgcgaggggcagatttttcgctaacccgcaccgagatactttcgctt
cgattgcgtggctttacttcactagaccagctaatgctgggcgaaccgcaagcagataag
attcgcattcaagcatttgaaaaggcgcggccatcgccgcaggcaaaggcgaattggcta
cgagacacggctcgcgaatggaaaaagcagcagcggcaacgaacagctgaacgtcatgcg
gttcgtgcaaaaaaatgccctcattcacaacatgtcaacgcgtactattcggcccgcggc
actgcgtttgagactgcatttgaatctgtactcagcttgctaaaaatcgacttccaacgt
cttgacgacaaaggcatcacaggggcgcctgactatctgctgcgtttatccggatctcct
gacattattgtggaactcaagtccaagacaaatgacaagcttgttgactacaactcggcg
gttgaggttctggcagcttcggaagttcatggatataaaggaacattctgcgtgacgcta
tgtcacccgggagtcgatccaagcgtgccgagcgttatcaattcttgcggtcgattaagt
gtcgttgagagtcacgatcttggcgaagcactattgcgaatctgcgaaggtaaccttaca
caagatcaattgtggcagtggttggcaaccccagggcaggcaaaagcggaagatttgcca
tttaaatcgtactcgtaa
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