Burkholderia glumae LMG 2196 = ATCC 33617: KS03_1443
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Entry
KS03_1443 CDS
T03820
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgu03016
]
KS03_1443
Enzymes [BR:
bgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KS03_1443
Transfer RNA biogenesis [BR:
bgu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KS03_1443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AJY65132
LinkDB
All DBs
Position
I:1560961..1563093
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AA seq
710 aa
AA seq
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MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQQADAA
AQQIDLDFLWECAPQEEFAYGTLADEYFGSGYGPVERAALVLRMHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAGYEEELKARRLPAAFEGKALALLTRPDKNSIEYKA
LDAAALALGVSPARLMLDCGGVASARALHEARFLAEHFPHGTGFPPVTVGPLPEDLPRAG
VDAFSIDDVTTTEIDDAFSVEHLPENRVRIGIHIAAPALGITRGDEIDAIARARLSTVYM
PGDKITMLPDDVVEVFTLKEGGYRPALSLYIIVDRATQDIVANETRAEYVFVKSNLRHNT
LEEVVTEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHISITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRALGAPTGPKRTR
MQTSAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYA
VVQGFDDTYTAYADHQRRMEYFWCLRWLRQENRRQVVAAVVKGDLVRLEEVPLLLHVPGL
GVHARGTRVLLDVMSIDELTIEASVRLLNVLDAPSASDTEAADEEGEGDETLLDAPDDSA
ESEAEALAESGAAEGEAGALAESGAAEGEAGAPAAGTDAGAAGSGEGDTK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtttttttcgaggaatcgggcagtttcaaggcgggtagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgccgggcgggcggcgcgccaaggtgcgcgccaaggat
gtgctgatcgaattcgacaagccggccgccggcgagctgatgcagcaggccgatgcggcc
gcgcagcagatcgatctcgattttctgtgggaatgcgcgccgcaggaggaattcgcctac
ggcacgctcgccgacgagtatttcggcagcggctatgggcccgtcgagcgcgccgcgctg
gtgctgcgcatgcacggctcgcccgtctatttccgccgcaaggggcgtggccagtaccag
cgcgcgcccgaggagcagctcaagatggcgctcgcctcgctcgagcgcaagcgccagcag
gcgctggtgcaggcgggctacgaggaggagctgaaggcgcgccggctgccggccgcgttc
gagggcaaggcgctcgcgctgctgacccggccggacaagaactccatcgaatacaaggcg
ctcgacgcggccgcgctcgcgctcggcgtgtcgccggcacggctgatgctcgactgcggc
ggggtggcctcggcgcgcgcgctgcacgaggcgcgctttctcgccgagcatttcccgcac
ggcacgggcttcccgcccgtgacggtcggcccgctgcccgaggacctgccgcgtgccggc
gtcgacgcgttctcgatcgacgacgtgaccaccaccgagatcgacgatgcgttctcggtc
gagcacctgcccgagaaccgggtgcggatcggcatccacatcgcggcgccggcgctcggc
atcacgcgcggcgacgagatcgacgcgatcgcgcgcgcgcggctgtccacggtctacatg
cccggcgacaagatcaccatgctgcccgacgacgtggtcgaggtgttcacgctgaaggag
ggcggttatcgcccggcgctgtcgctctacatcatcgtcgatcgcgcgacgcaggacatc
gtcgccaacgagacgcgcgccgagtacgtgttcgtcaagagcaacctgcgccacaacacg
ctcgaggaagtggtcaccgaggaaacgctcgcggccggcaccggcgactacccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggtggcg
cgcgccggctacggcttgaagcgcgaggtgcagcgcaataccgactacaacttctatgtc
gagggcgagcacatctcgatcacgccgcgccggcgcggttcgccgctcgacctgatcgtc
tcggagctcgcgatcctcgccaactcgacctggggcgcgttcctgcacgaccacacggtg
cccggcatctaccgctcgcagcgcgcgctgggcgcgccgaccgggccgaagcgcacgcgc
atgcagaccagcgccgcgccgcacgagggcctgggcgtcgcgcagtacgcctggagcacc
tcgccgctgcgccgctacgtcgatctcgtcaaccagtggcaactgctcgcctgcgtgcag
cacggcgtgaccgccaagctggccgcgccgttcaagccgaaggacgccgacctctacgcg
gtggtgcagggctttgacgatacctacacggcctatgccgaccaccagcgccgcatggag
tatttctggtgcctgcgctggctgcgtcaggagaaccgccggcaggtggtcgccgcggtc
gtcaagggcgacctggtgcggctcgaggaggtgccgttgctgctgcacgtgccggggctc
ggcgtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgatcgacgagctgacg
atcgaggcctcggtgcggctgctcaacgtgctcgacgcgccgagcgcgtcggacaccgag
gcggccgacgaggaaggcgagggcgacgagacattgctggacgcgcccgacgattcggcc
gagagcgaggccgaagcgctcgccgagtcgggcgcggccgagggcgaggccggagcgctc
gccgagtcgggcgcggccgagggcgaggccggagcgccggccgccggcaccgatgccggt
gcggctggcagcggcgagggcgacacgaaatga
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