Burkholderia glumae LMG 2196 = ATCC 33617: KS03_1569
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Entry
KS03_1569 CDS
T03820
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS03_1569 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgu03019
]
KS03_1569 (pcnB)
Enzymes [BR:
bgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KS03_1569 (pcnB)
Messenger RNA biogenesis [BR:
bgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KS03_1569 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Tad_C
Motif
Other DBs
NCBI-ProteinID:
AJY66434
LinkDB
All DBs
Position
I:complement(1702654..1704231)
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AA seq
525 aa
AA seq
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MIKKLIRKLLGQDDSAARDNAGAADAAPPSTGPAAASPAAVAAAKKQAARDAAKVAASRT
EPTIVPAAVHGIDPSLISRNAVRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDA
TPTEVQRLFRRARLIGRRFQIVHVQFGQELIEVSTFRALVDAPADAPASAPADAAPPRRM
KRDELDRRTHAVDASGRVLRDNVWGEQHEDAARRDFTINAMYYDPATQTVLDYHDGMADV
RARLLRMIGDPATRYREDPVRMLRVVRFAAKLGFDIEPHTREPIQPLADLINNVPAARLF
DEMLKLLLSGHALACLRQLRSEGLHHGLLPLLDVVLEQPQGEKFITLALNNTDARVRAGK
SVSPGFLFATLLWHDMRQRWNQNVANGEFPVPALQRAMDDVLEMQTEKLAIHKRYSADMR
EIWGLQLRLEKRSGRSAMRLLEHQRFRAGYDFLLLRCESGELDPAVAQWWTDFIDGDAAA
REALLTNGAPRDPAAPRKRRRRGGARNRRPADGTVQQADAQDAQD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcatccgcaagctgctcgggcaggacgattccgccgcccgcgacaac
gccggcgcggccgatgccgccccgccctccaccggccccgcggccgcctcgccggccgcc
gtggcagccgccaagaaacaggccgcgcgcgacgccgcgaaggtcgccgcgagccgcacc
gagccgaccatcgtgccggccgccgtgcatggcatcgacccgtcgctgatctcgcgcaac
gccgtgcgcgtgaccgatacgctgcagcaggccggcttccgcgcgttcatcgtcggcggc
gcggtacgcgacctgctgctcggcatcgccccgaaggatttcgacgtcgccaccgacgcg
acgcccaccgaggtgcagcgcctgttccgccgcgcccggctgatcggccggcgtttccag
atcgtccacgtgcagttcggccaggagctgatcgaggtctcgaccttccgcgcgctggtg
gacgcgccggccgacgcgcccgcgtcggcgcccgccgacgccgccccgccgcggcgcatg
aagcgcgacgagctggaccgccgcacccatgcggtggacgcgagcgggcgcgtgctgcgc
gacaacgtctggggcgagcagcacgaggacgcggcgcgccgcgacttcacgatcaacgcg
atgtactacgacccggcgacccagaccgtgctcgactaccacgacggcatggccgacgtg
cgcgcacgattgttgcgcatgatcggcgacccggccacgcgctaccgcgaggatccggtg
cggatgctgcgcgtggtgcgcttcgcggccaagctcggcttcgacatcgagccgcacacg
cgcgagccgatccagccgctcgccgatctgatcaacaacgtgcccgccgcgcgcctgttc
gacgagatgctgaagctgctgctctcgggccatgcgctcgcctgcctcaggcagttgcgc
agcgagggcctgcaccatgggctgctgccgctgctcgacgtggtgctggagcagccgcag
ggcgagaagttcatcacgctcgcgctcaacaacaccgacgcgcgcgtgcgcgccggcaag
tccgtgtcgccgggctttttgttcgcgacgctgctctggcacgacatgcgccagcgctgg
aaccagaacgtcgcgaacggcgagttcccggtgccggcgctgcagcgcgcgatggacgac
gtgctcgagatgcagaccgagaagctcgcgatccacaagcgctactcggccgacatgcgc
gagatctgggggctgcagctgcgcctcgagaaacgctcgggccgcagcgccatgaggctg
ctggaacaccaaaggtttagagcggggtatgatttcctcctcctgcgctgcgagtcgggc
gagctggacccggccgtggcgcaatggtggacggatttcatcgacggcgatgccgcggct
cgcgaggccttgctcacgaacggcgccccgcgcgatccggcggcaccgcgcaagcgccgc
cgccgcggcggcgcgcgcaaccgcaggccggccgacggcaccgtgcaacaggccgacgcc
caggacgcgcaggactga
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