Burkholderia glumae LMG 2196 = ATCC 33617: KS03_1966
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Entry
KS03_1966 CDS
T03820
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KS03_1966 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgu03400
]
KS03_1966 (recB)
Enzymes [BR:
bgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KS03_1966 (recB)
DNA repair and recombination proteins [BR:
bgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KS03_1966 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Col-Pyo_DNase
Motif
Other DBs
NCBI-ProteinID:
AJY66753
LinkDB
All DBs
Position
I:2144522..2148271
Genome browser
AA seq
1249 aa
AA seq
DB search
MTNAAAARAPAPVELDVFACALDGVNQIEASAGTGKTWNICALYVRLLLERDLDADQILV
VTFTKAATAELHERIRARLAQLAHALDTGDHGGDPFVAKLFETTLGPQGGIGTELAAKRV
RRALRKFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDAPLRFELAADFWYTRVEP
VAAAHPAFAAWLVAHRAGPDALDAQLARRLKKPLAQLRFDGLTPLHDTGGADADAVARAC
HGEAAALWHGGRERIAALLDAAQPSLNQRSHKPEAVADALAAWAAYFGELDAADGTAAPA
PLPKPALRLTRGALEKATKKGGTPPEHPFFAAAGALEAALAAAEQAQRGRWLALVAAWLA
EAPARLAEKKRTRRVVSFDDLLANLHHALAAHPWLADTLRRRYPAALIDEFQDTDPLQFA
IFDTIFAPAGPLFLVGDPKQAIYSFRAADLHTYLAARARARSCYTLAVNQRSTPAIVDAC
NRVFTANPHAFVLDDLDYPAVRAGTRQRAPFVDGTDPRAGAGDFRIWMLPEGDATPAKRD
AQWQAAQACAAEIARLMRGARGGAVRLGEAPLAPSDVAVLVQTHRQGSLVKRVLAAWGIG
SVELAQASVFATPDAEQLERVLAAIDAPGDLRRLRAALATDWFGLDAAALWRLDQGDAPA
GAAAAADAMGWVERFSRYRLLWRERGFAVMWRTLARELRIAERLIDGVGGERRVTDVNHL
AELTQARASAQPGIAPTLRWLAAQRRAGGGEDAQLRLESDRNLVQIVTVHKSKGLEYAVV
FCPFLNDGRLPEPREEALPDAREYHDATGAAVLHYGCDAAAAALAAAQARREQAAERARL
VYVALTRAVYRCYLVAGGYQVAKSTKEARRSVLNWLVAGGGHDFDTWLDTPPEADELAVG
WRRLASGPISIEPLPAVPDREPLAAGADADALGGARHAARFLRDAWRIASFSSLTASLAR
EQEGVAALPEEALRPDHDALAAAVDPLPRLDDGAARGGAPAEPDGDDIVAFPRGAAAGEC
LHLLFELSAFDRADSWPEAARRALHERPVEAEPTLAERLPAMMTRLVADVVATELVPGLR
LDALDPRRRLNEMAFLFPAASLDLLALRELLTAHGYPDVALEPGTLTGFFKGFIDMIVEH
DGRFWIVDWKSNHLGVTPDAYGPAALDAAMADHAYALQALLYTVALHRYLRVRLPGYDYD
THMAGYLYLFVRGVRPDWRSGGASAGVHAGRASRELVEALDALMREERG
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgccgcggccgcccgcgcaccggcgcctgtcgagctcgacgtgttcgcctgc
gcgctcgacggcgtgaaccagatcgaggcctcggccggcaccggcaagacctggaacatc
tgcgcgctctacgtgcggctgctgctcgagcgcgacctcgatgccgaccagatcctcgtc
gtcaccttcaccaaggcggccacggccgagctgcacgagcgcatccgcgcccgcctcgcg
cagctcgcgcacgcgctcgacaccggcgaccacggcggcgacccgttcgtcgcgaagctg
ttcgagaccaccctcgggccgcagggcggcatcggcacggagctggccgcgaagcgagtc
cggcgcgcgctgcgcaagttcgaccaggcggcgatccacaccatccacgccttctgccag
cgcgcgctgcaggaggcaccgttcgccgcggcgatgccgttcgcgttcgagatggaggcc
gacgacgcgccgctgcgcttcgaactcgcggccgacttctggtacacgcgcgtcgagccg
gtggcggcggcgcacccggcgttcgcggcctggctggtggcgcaccgcgccgggccggat
gcgctcgacgcacagctcgcgcggcgcctgaagaagccgctcgcccagttgcgcttcgac
ggcctgacgccgctgcacgacacgggcggggccgatgccgacgccgtcgcgcgcgcgtgc
cacggcgaggccgccgcgctctggcacggcgggcgcgagcgcatcgccgcgctgctcgac
gccgcgcagccgtcgctgaaccagcgctcgcacaagcccgaggcggtggccgacgcgctg
gccgcgtgggccgcctatttcggcgagctcgacgccgcggacggcacggccgcccccgcg
ccgctgccgaagccggcgctcaggctcacgcgcggcgcgctcgagaaagcgaccaagaaa
ggcggcacgccgcccgagcatccgttcttcgcggcggccggcgcgctcgaggcggcgctg
gccgcggccgagcaggcgcagcgcgggcgctggctcgcgctcgtcgccgcctggctggcc
gaggcgccggcgcggctcgccgagaagaagcgcacgcgccgcgtggtgtcgttcgacgat
ctgctcgcgaacctccatcacgcgctggcggcgcatccgtggctggccgacacgctgcgg
cgccgttatccggccgcgctgatcgacgagttccaggacaccgatccgctgcagttcgcg
atcttcgacacgatcttcgcgccggccggcccgctgttcctggtgggcgacccgaagcag
gcgatctacagcttccgcgcggccgacctgcatacctatctggccgcgcgcgcgcgggcc
cgctcgtgctacacgctggccgtcaaccagcgctcgacgccggccatcgtcgatgcctgc
aaccgcgtgttcacggcgaacccgcatgcgttcgtgctcgacgatctcgactatccggcg
gtgcgcgccggcacgcgtcagcgcgcgccgttcgtcgacggcaccgatccgcgcgcgggg
gcgggcgatttccgcatctggatgctgcccgagggcgacgccacgccggcgaagcgcgac
gcgcaatggcaggccgcgcaggcctgcgcggccgagatcgcgcggctgatgcgcggcgcg
cgcggcggcgcggtgcggctcggcgaggcgccgctcgcgccgtccgacgtcgccgtgctg
gtgcagactcaccggcagggcagcctcgtcaagcgcgtgctggccgcctggggcatcggc
agcgtcgaactcgcgcaggcctcggtgttcgccacgcccgacgccgagcagctcgaacgc
gtgctggccgcgatcgacgcaccgggcgacctgcgccggctgcgcgccgcgctcgccacc
gactggttcgggctcgacgccgccgcgctgtggcggctcgaccagggcgacgcgcccgcc
ggcgcggcggccgcagccgacgcgatgggctgggtcgaacgcttctcgcgctaccggctg
ctgtggcgcgagcgcggcttcgccgtgatgtggcgcacgctcgcgcgcgagctgcggatc
gccgagcggctgatcgacggcgtgggcggcgagcggcgcgtgaccgacgtgaaccatctc
gcggagctgacgcaggcgcgcgcctcggcgcagcccggcatcgcgccgacgctgcgctgg
ctcgccgcgcagcggcgcgcgggcggcggcgaggacgcgcagctgcggctcgaatcggac
cgcaacctggtgcagatcgtcaccgtccacaagtcgaaggggctcgaatacgcggtggtg
ttctgcccgttcctcaacgacggccggctgcccgagccgcgcgaggaagcgctgcccgac
gcgcgcgagtatcacgacgcgaccggcgcggcggtgctgcactacggctgcgacgcggcc
gccgccgcgctggcggccgcgcaggcgcgccgcgagcaggccgccgagcgtgcgcggctc
gtctacgtcgcgctcacgcgtgccgtctatcgctgctatctggtggcgggcggctatcag
gtggcgaagtcgacgaaggaagcgcggcgcagcgtgctgaactggctcgtggcgggcggc
ggccatgacttcgacacctggctcgacacgccgccggaggccgacgagctggccgtgggc
tggcgccggctggccagcggtccgatctcgatcgagccgctgcccgcggtgccggaccgc
gagccgctcgcggccggcgccgatgccgacgcgctcggcggcgcgcgccatgccgcgcgg
ttcctgcgcgacgcatggcggatcgccagcttcagttcgctcaccgcgtcgctcgcgcgt
gagcaggagggcgtggcggcgctgcccgaggaggcgctgcggcccgatcacgacgcgctg
gcggccgccgtcgatccgctgccgcgcctggacgacggcgcggcccgcggcggcgccccc
gccgagcccgacggcgacgacatcgtcgcgttcccgcgcggcgcggcggcgggcgagtgc
ctgcacctgctgttcgagctcagcgcgttcgaccgcgccgacagctggcccgaggcggcc
cggcgcgcgctgcacgagcgccccgtggaggccgagccgacgctcgccgagcggctgccg
gcgatgatgacgcggctggtggccgacgtggtggcgaccgagctggtgcccggcctgcgg
ctcgacgcgctcgatccgcgccggcgcctgaacgagatggcgttcctgttcccggccgcc
tcgctcgatctgctcgcgctgcgcgagctgctgaccgcgcacggctatcccgacgtcgcg
ctcgaaccgggcacgctcaccggcttcttcaagggcttcatcgacatgatcgtcgagcac
gacggccgcttctggatcgtcgactggaaatcgaaccatctcggcgtgacgcccgatgcc
tatgggccggccgcgctcgacgcggcgatggccgatcatgcctacgcgctccaggcgctg
ctctacacggtggcgctgcaccgctatctgcgggtgcggctgcccggctacgactacgac
acgcacatggcgggctatctctatctgttcgtgcgcggcgtgcggcccgactggcgcagc
ggcggcgcgagcgccggggtgcatgccggacgcgcctcgcgggagctcgtcgaggcgctc
gacgccctgatgcgcgaggagcgcggatga
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