Burkholderia glumae LMG 2196 = ATCC 33617: KS03_2068
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Entry
KS03_2068 CDS
T03820
Name
(GenBank) lysM domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bgu01011
]
KS03_2068
Enzymes [BR:
bgu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KS03_2068
Peptidoglycan biosynthesis and degradation proteins [BR:
bgu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KS03_2068
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
Peptidase_M56
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AJY66124
LinkDB
All DBs
Position
I:2262144..2263751
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AA seq
535 aa
AA seq
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MRFLISALLVLLLAACASPGPTAPSAASDPQAAADFIRKTSTAKDTVDVDKQSVGDLTTK
DSDLWARIRRGFQIPDLQSDLVDMQTTWYTERPDYVQRMTERSQKYLYHIVEELEARNMP
TELALLPFIESAYNPQALSVAKAAGMWQFIPGTGRTYNLKQNMWQDERRDVLASTSAALD
YLSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYQSLRMPNETRNYVPKLQA
VKNIIAHPQQYGLTLPDIPNHPYFVTVTTSHDIDVKMAAQLAGLSLEEFKALNPSFSKPV
ILGATQPQILLPFDNASQFEKGLKSYNGQLSSWTTYTVTERARPAAIAEKIGVDADTLMQ
VNKIPAGMRLKPGSTIVVPRSDDDDEDISADVAENAVLAMEPDVPDTRKMLIRVRRKQSM
AALASRYGVSVGQLKGWNRTRRDLVMPGQTIVLHVPAGRAVPAEPGPERIATSVGGARIE
RASLHTGGTAAARGRHAAPAKAAARSTAKSTARSTAAAKSAKPAVKPAAHKAKKK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcctgatcagtgcgctattggttttgctgctcgccgcttgcgcgagccccgga
ccgaccgccccatccgccgcttccgacccgcaggccgctgccgacttcattcgcaagacc
tcgaccgccaaagacaccgtcgacgtcgacaagcagtcggtcggcgatctgaccaccaag
gattccgatctctgggcgcgcatccgccgcggctttcagatccccgatctgcagagcgac
ctggtcgacatgcagaccacctggtataccgagcgtcccgactacgtgcagcgcatgacg
gagcgctcgcaaaagtatctctaccatatcgtcgaggagctcgaggcgcgcaacatgccg
accgagctcgcgctgctgccgttcatcgaatcggcctacaacccgcaggcgctgtcggtc
gcgaaggccgccggcatgtggcagttcattcccggcaccggccgcacctacaacctgaag
cagaacatgtggcaggacgagcgccgcgacgtgctggcctcgaccagcgccgcgctcgac
tacctgtcgcgcctgcatgacatgttcggcgactggtatctggcgctggccgcctacaac
tggggcgagggcaacgtgcagcgcgcgatcgcgcgcaaccaggcggccggcctgccgacc
gactaccagagcctgcgcatgccgaacgagacgcgcaactacgtgccgaagctgcaggcg
gtgaagaacatcatcgcccatccgcaacagtacggcctgacgctgcccgacattccgaac
catccgtatttcgtgacggtcacgacctcgcacgacatcgacgtgaagatggcggcgcaa
ctggccggcctctcgctcgaggagttcaaggcgctcaacccgtctttctcgaagccggtg
atactcggcgcgacccagccgcagatcctgctgccgttcgacaatgcctcgcagttcgag
aagggcctgaagtcgtataacggccagctctccagctggaccacctatacggtcaccgag
cgtgcgcggccggcggcgatcgccgagaagatcggggtcgacgccgacacgctgatgcag
gtgaacaagattccggccggaatgcggctgaagccgggctcgaccatcgtcgtgccgcgc
agcgacgacgacgacgaggacatcagcgccgacgtggccgagaacgccgtgctcgcgatg
gagcccgacgtgcccgacacgcgcaagatgctgatccgcgtgcgccgcaagcagtcgatg
gccgcgctggcgagccgctacggcgtgtcggtcggccaactgaagggttggaaccgcacc
cgccgcgacctggtgatgccgggccagaccatcgtcctgcacgtgccggcgggccgtgcc
gtgccggccgaacccggccccgagcggatcgccacgtcggtgggcggcgcacgcatcgaa
cgcgcgagcctgcacacgggcggtacggccgccgcgcgcgggcggcacgcggccccggcg
aaggcggcggcccgatcgaccgcgaagtcgaccgccaggtcgacggccgccgcgaagagc
gcgaagccggccgtcaagcccgcggcgcataaggcgaagaagaaataa
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