Burkholderia glumae LMG 2196 = ATCC 33617: KS03_2401
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Entry
KS03_2401 CDS
T03820
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS03_2401 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgu03021
]
KS03_2401 (rho)
03019 Messenger RNA biogenesis [BR:
bgu03019
]
KS03_2401 (rho)
Transcription machinery [BR:
bgu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KS03_2401 (rho)
Messenger RNA biogenesis [BR:
bgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KS03_2401 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJY66895
LinkDB
All DBs
Position
I:complement(2626453..2627715)
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AA seq
420 aa
AA seq
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MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKADILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtgtccgaattgatcgaaatggccaacggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctaaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtcctgccggac
ggcttcggtttcctgcgctcgcccgaaatgtcgtatctcgcgagcacggacgacatctat
atcagcccgtcgcagatccgccgcttcaacctgcataccggcgacacgatcgaaggtgag
gtccgcacgccgaaggacggcgagcgctacttcgcactggtcaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctttcgctcgaacgcgaaatgcgcggcgaggaaaacgtgacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtcgcctcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcgcacgcgatcaagcagaaccacccg
gacgtgattctgttcgtgctgctgatcgacgagcgtccggaagaagtgacggaaatgcag
cgctcggtggcgggcgaagtgatcgcctcgaccttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctggtggaaatgaagcacgacgtg
gtgatcctgctcgactcgatcacgcgtctcgcgcgcgcctacaacaccgtgatcccggcc
tcgggcaaggtgctcacgggcggcgtcgacgccaacgccctgcagcgcccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgaccatcatcggtaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtccacctggaacgccgtctcgcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaggaaatgctgatcaaggccgacatccttcagaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcgatggaattcctgctc
gacaagattcgccagaccaagagcaattccgagttcttcgacctgatgcgccgcggcggc
tga
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