Burkholderia glumae LMG 2196 = ATCC 33617: KS03_3023
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Entry
KS03_3023 CDS
T03820
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu03420
Nucleotide excision repair
bgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KS03_3023
03430 Mismatch repair
KS03_3023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgu03400
]
KS03_3023
Enzymes [BR:
bgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS03_3023
DNA repair and recombination proteins [BR:
bgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KS03_3023
MMR (mismatch excision repair)
Other MMR factors
KS03_3023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AJY68091
LinkDB
All DBs
Position
I:complement(3287216..3289585)
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AA seq
789 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGYASPPTVLAVTF
TNKAAREMLSRLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKASNIDDEKYPPKNVQYFINNAKEQGLRPDKVEANDSFNRMFVQLYQAYDQQCQR
EGVVDFPELLLRCFELLSYNPALRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGEQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANHLIAHNSRR
LGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEIRSLINGGMARSEVAVLYRSNAQSRAI
EHTLMTAGIAYRVYGGLRFFERQEIKHALAYLRLIDNPSDDTAFARVVNFPTRGIGARSI
EQLADAARLHNCAMAAAIPYVTGKAGTSLGAFANLIAKLRAETRQMSLPEMVEYVVRASG
LADFYQGEREGQDRLENLQELVNAAAAFVSEEGYGLDTPARSIPLRPGASAAPELAAGGD
AAGAVLAPAAPDDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEF
SAVFITGLEEGLFPHENSALETDGLEEERRLMYVAITRAKERLYLSFAQSRLLHGQTRYN
IRSRFFDELPQQVLKWLTPQVEAGSRWGGRADNAGWGRNWFARPGGAAGGTRDAVVDAAV
TAPLPAFANAQRAAGNGFKVGQPVFHTKFGEGTVTALEGEGADAKAQVRFKRHGEKWLAL
AVAKLQAVE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgttagcgaacctgaatcccgaacaatacgccgccgtcacgctgccgaac
gagcccgcgctgattctcgccggtgcgggcagcggcaagacgcgcgtgctgatcacgcgg
atcgcgtggctgatccagcacggctacgcgtcgccgcccaccgtgctggccgtcaccttc
acgaacaaggccgcgcgcgagatgctctcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcaccttccacggcctctgcaaccgcatgctgcgcgcccactat
cgcgacgccgggctgccgcagacgttccagatcctcgacacggccgaccagctctccgcc
atcaagcggctgatgaaggcctcgaacatcgacgacgagaagtacccgccgaagaacgtc
cagtacttcatcaacaacgccaaggagcaggggctgcgcccggacaaggtcgaggccaac
gacagcttcaaccggatgttcgtgcagctctaccaggcctacgaccagcagtgccagcgc
gagggcgtggtcgatttccccgagctgctgctgcgctgcttcgagctgctgagctacaac
ccggcgctgcgcgcgcactatcaggcgcgcttccggcatatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagctgctcgcgggcgagcagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctatgcgtttcgcggcgcgaacgtcggcaac
atgcgcgacttcgaggacgagttccgggtccgcaacctgatcaagcttgagcagaactac
cgctcgcacggcaacatcctcgacgcggccaaccacctgatcgcccacaactcgcgccgg
ctcggcaagaacctgcgcaccgacgcgggccacggcgagccggtgcgcgtctacgaggcg
gccaccgattcgcaggaggccggctggatcgtcgaggagatccgctcgctgatcaacggc
ggcatggcgcgcagcgaggtggccgtgctctatcgcagcaatgcgcagtcgcgcgcgatc
gagcacacgctgatgacggccggcatcgcctatcgcgtctacggcggcctgcgcttcttc
gagcgccaggaaatcaagcacgcgctcgcctacctgcgcctgatcgacaaccccagcgac
gacacggcattcgcacgcgtggtcaacttccccacgcgcggcatcggcgcgcgctcgatc
gagcagctggccgacgccgcgcgcctgcacaattgcgcgatggcggcggcgattccctac
gtgacgggcaaggccggcacgagcctgggcgcgttcgcgaacctgatcgcgaagctgcgc
gccgaaaccaggcagatgagcctgccggagatggtcgagtacgtggtgcgcgcgagcggc
ctggccgatttctaccaaggcgagcgcgaagggcaggaccgcctcgagaacctgcaggaa
ctcgtcaacgcggccgccgcgttcgtcagcgaggagggctacgggctcgacacgccggcg
cgctcgattccgctgcgcccgggcgcgagcgccgcgcccgaactggcggcgggcggcgac
gcggccggcgccgtgctcgcgccggccgctcccgacgatccggcccagaaccccgacacc
atgacgccgctcgcgggctttctctcgcatgcgtcgctggaggccggcgacaatcaggcc
caggccggccaggacgcggtgcagctgatgacggtgcatgcggccaaggggctcgaattc
tcggcggtgttcatcaccgggctcgaggaaggcctgttcccgcacgagaacagcgcgctc
gaaaccgacgggctcgaggaggagcgccggctgatgtacgtggcgatcacgcgtgccaag
gagcggctctacctgtcgttcgcgcagagccggctgctgcacggccagacccgctacaac
atccgttcgcgcttcttcgacgagctgccgcagcaggtgctgaagtggctcaccccgcag
gtcgaggccggcagccgctggggcggccgcgccgacaacgccggctggggccgcaactgg
ttcgcccggccgggcggcgccgcaggcggcacgcgcgacgcggtggtggacgcggccgtg
acggcgccgctgcccgcgttcgcgaacgcgcagcgcgcggccggcaacggcttcaaggtc
ggccagccggtgttccataccaagttcggcgagggcacggtgacggccctcgagggcgag
ggcgccgatgcgaaggcgcaggtccgcttcaagcgccacggcgagaaatggctcgcgctc
gcggtggcgaaacttcaggcagtggaatga
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