Burkholderia glumae LMG 2196 = ATCC 33617: KS03_3180
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Entry
KS03_3180 CDS
T03820
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KS03_3180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgu03400
]
KS03_3180
Enzymes [BR:
bgu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KS03_3180
DNA repair and recombination proteins [BR:
bgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KS03_3180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJY65673
LinkDB
All DBs
Position
I:complement(3481968..3482879)
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AA seq
303 aa
AA seq
DB search
MATGRKVPAKRAARTATGASAAAKRVPASKVAAKRAAGPAEGANGAAHKPLARGAAKPAR
ADAAERRELAVDAADSGARRARAAEAAVPVQLADADVVVRPPYWDKACADLVKRDRILKK
LIPKFGPAHLVKRGDPFVTLARSVVGQQISVATAQAVWAAIEAACPKLTPQQVIRLGQEK
LAACGLSKRKSDYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGIGRWTAEMFLIF
NLSRPDVLPLDDLGLIRAISINYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDPES
GDA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggcaggaaagtgccggcaaagcgggcggcgcgcacggcgacgggcgcgtcg
gcggccgcgaagcgcgtgccggccagcaaggtcgccgcaaagcgtgcggccggccccgcc
gagggcgccaacggcgccgcgcacaagccgctcgcgcgcggcgcggcgaagcccgcgcgc
gccgacgcggccgagcgtcgcgaactggcggtcgacgccgccgacagcggcgcgcggcgc
gcgcgcgcggccgaggcggccgtgccggtgcagcttgccgatgcggacgtggtggtgcgc
ccgccctactgggacaaggcgtgcgccgatctcgtcaagcgcgaccggattctcaagaag
ctgatccccaagttcggtcccgcgcatctcgtcaagcgcggcgatccgttcgtcacgctc
gcacgctcggtggtcggccagcagatctcggtcgccacggcgcaggccgtttgggccgcg
atcgaggccgcgtgcccgaagctcacgccgcagcaggtgatccgcctcggccaggagaag
ctcgccgcctgcggcctgtcgaagcgcaagtccgattacattctcgatcttgcccagcat
ttcgtgtcgggcgcgctgcacgtcgacaaatggacctcgatggaagacgaggccgtgatc
gccgagctcacgcagatccgcggcatcggccgttggaccgccgagatgttcctgatcttc
aatctgtcgcgcccggacgtcctgccgctcgacgacctcggcctgattcgcgcgatcagc
atcaactacttcagcggcgagcccgtcacgcgcagcgaggcgcgcgaggtcgcggcgaac
tgggagccgtggcgtacagtcgcgacctggtacatgtggcgcagcctggatcccgaatcc
ggtgatgcgtaa
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