Burkholderia glumae LMG 2196 = ATCC 33617: KS03_3292
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Entry
KS03_3292 CDS
T03820
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgu03400
]
KS03_3292
Enzymes [BR:
bgu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KS03_3292
DNA repair and recombination proteins [BR:
bgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KS03_3292
Prokaryotic type
KS03_3292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJY64887
LinkDB
All DBs
Position
I:complement(3608796..3610259)
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AA seq
487 aa
AA seq
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MSADSQAQPALVWFRDDLRVTDNPALARAAESGRPLVCVYVFERDGTRPLGGAVRWWLDG
ALRSLDAKLAAQGGGLVVLEGDERETIAALAGELGAGAVYWNRRYDGLARETDAALKRSL
KEAGIEVESFNGALLHEPWEIRTGSGGAFQVFTAYWRAARAAGELPAPLAEPAKWRFHRL
PEALARRATRIDALGLLPVRPDWAGGLREAWEPSEEGGLARLEAFLDKQIRGYGDARDRP
DRPATSRLSPYLRFGQLSARQVWHAAQAAGREGGAAVAADIEKFLSELGWREFNTSLLYH
FPELPMRNYRDRFDAMPWRSDEAAFAAWCRGRTGYPLVDAGMRELWATGWMHNRVRMVTA
SFLIKHLLIDWRAGERWFWDTLVDADIANNSANWQWVAGSGADAAPYFRIFNPVMQGRKF
DPDGAYVRRWVPELAGLPADAIHEPWRAKPVVLEAAGVVLGRTYPAPIVDHDAARKRALG
ALEATKR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgccgattcccaagcccagcccgcgctcgtctggttccgtgacgatctgcgcgtg
accgacaacccggcgctcgcgcgcgcggccgagtcgggccgcccgctcgtctgcgtctat
gtgttcgagcgcgacggcacgcgtccgctcggcggcgcggtgcgctggtggctcgacggc
gcgctgcgttcgctcgatgcgaagctcgccgcgcagggcggcggcctcgtcgtgctcgaa
ggcgacgagcgtgagacgatcgccgcgctcgccggcgagctgggcgccggcgcggtctat
tggaaccgccgctacgacgggctcgcacgcgaaaccgacgccgcgctgaagcgttcgctg
aaggaggccggtatcgaggtggagagcttcaacggcgcgctgctgcacgagccgtgggag
atccgcaccggcagcggcggcgcgttccaggtgtttacggcctactggcgtgcggcgcgc
gcggcgggcgagctgcctgcgccgctcgcggagccggcgaaatggcgctttcaccggctg
cccgaggcgctcgcgcggcgcgccacgcgcatcgacgcgctcggcctgctgccggtgcgc
cccgactgggcgggcggcctgcgcgaggcgtgggagccgtccgaggagggcgggctcgcg
cggctcgaagcattcctcgacaagcagatccgcggctacggcgacgcgcgcgaccggccc
gaccgcccggccaccagccggctctcgccgtacctgcgcttcggccagctgtcggcgcgg
caggtctggcacgcggcacaggccgccgggcgcgagggcggcgcggcggtggcggccgac
atcgagaagtttctcagcgaactgggctggcgcgagttcaacacgagcctgctctatcat
tttcccgagctgccgatgcgcaactatcgcgaccgcttcgacgcgatgccgtggcgcagc
gacgaggccgcgttcgctgcgtggtgccgcggccgcaccggctacccgctcgtcgatgcg
ggcatgcgcgagctgtgggccacgggctggatgcacaaccgcgtgcggatggtgacggcc
tcgttcctgatcaagcacctgctgatcgactggcgcgcgggcgagcgctggttctgggac
acgctggtggacgccgacattgccaacaactcggcgaactggcaatgggtggccggcagc
ggcgccgacgcggcgccgtatttccggatcttcaatccggtcatgcagggccgcaagttc
gatccggacggcgcctacgtgcgccgctgggtgcccgagctggcgggcctgccggccgac
gcgatccacgagccgtggcgcgccaagccggtggtgctggaggcggccggcgtcgtgctc
ggccgcacctatccggcgcccatcgtcgaccacgacgccgcgcgcaagcgcgcgctgggc
gcgctcgaagcgaccaagcgctag
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