Burkholderia glumae LMG 2196 = ATCC 33617: KS03_4339
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Entry
KS03_4339 CDS
T03820
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu03030
DNA replication
bgu03410
Base excision repair
bgu03420
Nucleotide excision repair
bgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KS03_4339 (polA)
03410 Base excision repair
KS03_4339 (polA)
03420 Nucleotide excision repair
KS03_4339 (polA)
03440 Homologous recombination
KS03_4339 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgu03032
]
KS03_4339 (polA)
03400 DNA repair and recombination proteins [BR:
bgu03400
]
KS03_4339 (polA)
Enzymes [BR:
bgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KS03_4339 (polA)
DNA replication proteins [BR:
bgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KS03_4339 (polA)
DNA repair and recombination proteins [BR:
bgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KS03_4339 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KS03_4339 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AJY64785
LinkDB
All DBs
Position
II:1177922..1180675
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVRAEY
SACVFDAKGKTFRDDLFVDYKANRPSMPPDLALQIEPIHEAVRALGWPLLMIEGVEADDV
IGTLARAAEARGMKVVISTGDKDLAQLVTSHVTLVNTMTNELLDREGVIAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYETLDGIVEHAAEIKGVVGDNLRRALDFLP
LARKLVTVETACELKPQVESIEASLATGAESRAALLPIFETYGFKTWRRELDAMPEDGAA
AAAPEGIDPVPAAAEIERNYETVQTWAQFDAWLAKIDAAALTSFDTETTSLDPMVAQIVG
LSLCTEPGSAAYVPVAHRGPDAPEQLPRDEVLAKLKPWLENPARKKVGQHLKYDAQVLAN
YDIALNGVEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQQIGFDEVAL
DVAAAYAAEDADITLQLHRVMYPQVEREAGLKRVYTEIELPVSFVLRKMERTGVLIDSGR
LEAQSREIAVRLVELEREAYALAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMINASTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIAAPGCKIVSADYSQIELRIMAHISGDESLLRAFSQGE
DIHRATAAEVFGVTPLEVSTDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVANYMETTRASAKAQGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDGWLERDGLRSRMIMQVHDELVLEVPDAELALVREKLPEMMSGVAKLK
VPLVAEVGAGTNWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacggaacctggaaggtaaaaccctgctattggtggatggttcgagctat
ctctatcgggcttaccacgcaatgcccgatttgcgcgggccgggtggggagccgactggc
gcgctctacgggatcatcaatatgctgcgccgcatgcgcaaggaagtccgagcagagtat
agcgcgtgcgtgttcgatgcaaagggcaaaacgttccgcgacgatctcttcgtcgactat
aaggcgaaccgtccgtcgatgccgcccgatctcgcgctgcagatcgagccgatccacgag
gccgtgcgtgcgctcggctggccgctcctgatgatcgagggcgtggaggccgacgacgtg
atcggcacgctcgcgcgcgcggccgaggcgcgcggcatgaaggtcgtgatctcgaccggc
gacaaggatctcgcccaactcgtcacgagccacgtcacgctcgtcaacacgatgacgaac
gagctgctcgatcgcgagggcgtgatcgcgaagttcggcgtgccacccgagcgcatcgtc
gattacctgtcgctgatcggcgataccgtcgacaacgtgcccggcgtcgagaagtgcggc
ccgaagacggccgtcaaatggctcacgcagtacgagacgctcgacggcatcgtcgagcat
gcggccgagatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgatttcctgccg
ctcgcgcgcaagctcgtgacggtcgagacggcctgcgagctgaagccgcaggtcgagtcg
atcgaggcgtcgctcgccaccggtgcggagtcgcgcgccgcgctcttgccgatcttcgag
acctatggcttcaagacctggcggcgcgaactcgacgcgatgcccgaggacggcgccgcc
gcggccgcgcccgagggcatcgacccggtgccggccgccgccgagatcgagcgcaactac
gaaaccgtgcagacctgggcgcagttcgacgcgtggctggcgaagatcgacgcggccgcg
ctgacgtcgttcgacaccgagacgacctcgctcgatccgatggtcgcgcagatcgtcggc
ctgtccttgtgcaccgagcccggcagcgcggcctacgtgccggtcgcgcatcgcggcccc
gacgcgcccgagcaactgccgcgcgacgaggtgctcgcgaagctcaagccttggctcgaa
aatccggcgcgcaagaaggtcggccagcatctgaagtatgacgcgcaggtgctcgccaac
tacgacatcgcgctgaacggcgtcgagcacgatacgctgctcgagtcctacgtgctcgaa
tcgcatcgcacgcacgacatggacagcctcgcgctgcgccatctcggcgtcaagacgatc
aagtacgaggacgtggcgggcaagggggcgcagcagatcggcttcgacgaggtcgcgctg
gacgtggccgccgcctacgccgccgaggacgccgacatcacgctgcagctgcaccgtgtg
atgtatccgcaggtcgagcgcgaagcgggcctgaagcgcgtctataccgagatcgagctg
cccgtgtcgttcgtgctgcgcaagatggagcgcaccggcgtgctgatcgacagcggccgg
ctcgaggcacagagccgcgagatcgcggtgcggctcgtcgaactcgaacgcgaggcctat
gcgctcgcgggcggcgagttcaacctcggctcgcccaaacagatcggccaaatcttcttc
gagaagctgcagctgccggtggtgaagaagacgccgagcggggcgccctccaccgacgag
gaggtgctgcagaagctggccgaggactatccgctgccgaagctgctgctcgagcatcgc
ggcctgtcgaagctcaagtccacctacaccgacaagctgccgcgcatgatcaacgcgagc
acggggcgtgtccacaccaactatgcgcaggccgtggccgtgacggggcggctcgcgtcg
aacgatccgaatctgcagaacatccccgtgcgcacggccgagggccggcgcattcgcgag
gcgttcatcgccgcgcccggctgcaagatcgtgtcggccgactattcacagatcgagctg
cgcatcatggcgcacatctccggcgacgaatcgctgctgcgcgcgttctcgcagggcgag
gacatccaccgcgcgaccgccgccgaggtgttcggcgtgacgccgctcgaagtcagcacc
gaccagcgccgcatcgccaaggtcatcaacttcggcctgatctacgggatgagcgcgttc
ggtctcgcctcgaatctcggcatcacgcgcgacgccgccaagctctacatcgaccgctat
ttcgcgcgttatccgggcgtggcgaactacatggaaacgacgcgcgcgtcggccaaggcg
cagggctacgtcgaaaccgtgttcggccgccgcctgtggctgcccgagatcaacggcggc
aacggcccgcgccgccaggcggccgaacgcgccgcgatcaacgcgccgatgcagggcacg
gccgcggacctgatcaagctgtcgatgatcgccgtggacggctggctcgaacgcgacggc
ttgcgttcacgcatgatcatgcaggtccacgacgaactcgtgctcgaggtgcccgatgcc
gaactggcgctggtgcgcgagaagctgcccgagatgatgagcggcgtcgccaagctgaag
gtgccgctggtggccgaggtcggtgccggcaccaactgggaggaggcccactga
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