Burkholderia glumae LMG 2196 = ATCC 33617: KS03_4353
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Entry
KS03_4353 CDS
T03820
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KS03_4353 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgu03021
]
KS03_4353 (rpoD)
Transcription machinery [BR:
bgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KS03_4353 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AJY64142
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All DBs
Position
II:1195804..1197852
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AA seq
682 aa
AA seq
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MTKKLNEVSVDDDATQSEEQPTAAAAGKEKTTKARDRRAKEKLLLKEAFASSQPGTAEEL
EERRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDA
ETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEDGLRHMVMAISACPTTIADILAMAERVANDEIRVDELVDGLLDPNAEDTDGFNA
KEAEEAEEAEEEEEEANEDEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMR
RAFEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVV
DKCGMPRSEFIARFPGSETDLTWAEKVAAESHSYSAILVRNIPAIHEQQQRLLDLQARVV
LPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGL
MKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQ
ETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDSNTVAPA
DAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEA
KALRKLRHPSRSDKLKSFLEGN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaacccagagcgaagagcag
ccgacggccgctgcagcgggcaaggaaaagacgaccaaggcgcgcgaccgccgcgcgaag
gaaaagctgctgctgaaggaagcgttcgcgtcgagccaacccggcaccgccgaggagctc
gaggagcggcgcgtgaagctgcgtgcgctcatcaagctgggcaaggagcgcggcttcctg
acctatgccgaaatcaacgaccacctgcccgacaacttcacggaaacggaagcgctggaa
ggcatcatcggcacgttcaacgacatgggcgtggcggtgtacgagcaggcgcccgacgcg
gaaacgctgctgctcaacgataacgcgcccgccgcttcgtcggacgacgaagtcgaggaa
gaagccgaagtcgcgctgtcgaccgtcgattccgagttcggtcgcacgaccgacccggtg
cggatgtacatgcgcgagatgggcacggtcgagctgctcacgcgtgaaggcgaaatcgag
atcgcgaagcgtatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccg
accacgatcgctgacatcctcgcgatggccgagcgcgttgccaacgacgagattcgtgtg
gacgaactcgttgacggcctgctcgatccgaacgcagaggacaccgacggcttcaacgcg
aaggaagcggaagaggccgaggaagccgaggaggaagaagaggaggcgaacgaggacgag
gaagaggaggacgacgacggcgccgcccaggccaccgccaacgccgcccagctcgaagcg
ctcaagcgcgcctcgctcgagaagttcgcgctgatcagcgagtggttcgacaagatgcgt
cgtgcgttcgagaaggagggctacaagtcgaagtcctacctgaaggcgcaggaaaccatc
cagaacgaactgatgtcgatccgcttcaccgcgcgcaccgtcgagcgtctgtgcgacacg
ctgcgcgcgcaggtggatgaggtccggcaggtcgagcgccagatcctgcacatcgtcgtc
gacaagtgcggcatgccgcgctcggaattcatcgcgcgtttcccgggcagcgagaccgat
ctcacgtgggccgagaaggttgcggcggaaagccattcgtatagcgcgatcctggtgcgc
aacatcccggcgatccacgaacagcagcagcgcctgctcgacctgcaggcgcgcgtggtg
ttgccgctgaaggacctgaaggaaaccaaccggcagatggcggccggcgaactgaaggcg
cgccaggccaagcgcgagatgaccgaggccaacctgcgtctcgtgatctcgatcgctaag
aagtatacgaaccgcggcctgcagttcctcgacttgatccaggaaggcaacatcggcctg
atgaaggcggtggacaagttcgaatatcgtcgcggctacaagttctcgacctatgcgacg
tggtggatccgccaggccatcacgcgctcgatcgcggaccaggcgcgcaccatccggatc
ccggttcacatgatcgagacgatcaacaagatgaaccggatctcgcgtcagatcctgcag
gaaaccggcctcgaacctgatccggcgacgctcgccgagaagatggagatgcccgaggac
aagatccgcaagatcatgaagatcgcgaaggaaccgatctcgatggaaacgccgatcggc
gacgacgacgattcgcatctgggcgacttcatcgaggattcgaacacggttgcgccggcc
gatgccgcgctgcatgcgagcatgcgcgacgtcgtcaaggacgtgctcgattcgctgacg
ccgcgcgaggcaaaggtgctgcggatgcgcttcggcatcgagatgagcaccgaccatacg
ctcgaggaagtcggcaagcagttcgacgtcacgcgtgagcggattcgccagatcgaggcc
aaggcactgcgcaagctgcgtcatccgagccgttcggacaagctgaaatcgttcctcgaa
gggaactga
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integrated database retrieval system
