Burkholderia glumae LMG 2196 = ATCC 33617: KS03_488
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Entry
KS03_488 CDS
T03820
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgu
Burkholderia glumae LMG 2196 = ATCC 33617
Pathway
bgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS03_488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgu03019
]
KS03_488
Enzymes [BR:
bgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KS03_488
Messenger RNA biogenesis [BR:
bgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KS03_488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
CMS1
P-loop_SecA
Utp25_C
DegT_DnrJ_EryC1
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AJY64971
LinkDB
All DBs
Position
I:533297..534724
Genome browser
AA seq
475 aa
AA seq
DB search
MSFASLGLAEPLVRAVNELGYNEPTPIQTQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLNAFQPANANGKRAVRALILTPTRELAAQVEESVRAYGKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSQLDILVLDEADRMLDMGFIHDIKRVLAKLPA
KRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAETIAQKIHPVDRDRKREMLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISALAIHGNKSQSARTRALSEFKAGTLQVL
VATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKPLLRD
IERLIKREIPQQVIAGFEPDPNAKPEPIQRRSGGGGGRQPQGGGQGKPQAARRDGGQSGA
AKPAARPVKAAGGGAAKPAVKPAARPQAGGGNGNGAQPANRSRSGRGSGGSQRGR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcttccctcggcctcgccgaacccctcgtgcgagccgtcaacgaactcggc
tacaacgaaccgaccccgatccagacccaggcaatcccggccgtgctcggcggcggcgac
ctgctggccggcgcgcagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
cagcgcctgaacgcgttccagcccgccaacgcgaacggcaagcgcgccgtgcgcgcgctg
atcctcacgcccacccgcgaactcgccgcgcaggtcgaggaaagcgtgcgcgcctacggc
aagtacctgaagctgcgctccaccgtgatgttcggcggggtcagcatcaatccgcagatc
gacgcgctcaagcgcggcgtcgacatcgtggtggccacccccgggcgcctgctcgaccac
atgcagcagaagaccatcgacgtctcgcagctcgacatcctggtgctcgacgaggccgac
cgcatgctcgacatgggcttcatccacgacatcaagcgcgtgctggcgaagctgccggcc
aagcgccagaacctgctgttctcggccaccttctccgacgagatcaaggcgctcgccgac
agcctgctcgactcgccggcgctgatcgaggtcgcgcgccgcaacaccaccgccgagacg
atcgcccagaagatccacccggtggaccgcgaccgcaagcgcgagatgctcacccacctg
atccgcgagcacaactggtttcaggtgctggtgttcacgcgcaccaagcacggcgcgaac
cggctcgccgagcagttgaccaaggacggcatcagcgcgctcgcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctcagcgaattcaaggccggcacgctgcaggtgctg
gtggcgaccgacatcgccgcgcgcggcatcgacatcgaccagttgccgcacgtggtcaac
tacgagctgccgaacgtgccggaagactacgtccaccggatcggccgcaccggccgcgcg
ggcgcgaacggcgaggcggtgtcgctggtctgcgtcgacgagaagccgctgctgcgcgac
atcgagcggctcatcaagcgcgagattccgcagcaggtgatcgccggcttcgagcccgat
ccgaacgccaagccggagccgatccagcgccgcagcggcggcggcggcgggcgccagccg
cagggcggcggacagggcaagccgcaggcggcgcgccgcgacggcggccagtcgggcgcc
gcgaagcccgccgccaggccggtcaaggccgcgggcggcggtgctgcgaagccggccgtg
aagcctgccgccaggccgcaagcgggcggcggcaatggcaacggtgcgcagccggcgaat
cgcagccgctcaggacgcggcagcggcggcagccagcgcgggcgctga
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integrated database retrieval system
