Bordetella genomosp. 8: CAL12_00945
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Entry
CAL12_00945 CDS
T09515
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgv03021
]
CAL12_00945
Transcription machinery [BR:
bgv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAL12_00945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_AsnC-type
HTH_PafC
HTH_24
FrhB_FdhB_C
Motif
Other DBs
NCBI-ProteinID:
ARP79532
UniProt:
A0A1W6YEQ8
LinkDB
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Position
203355..204242
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AA seq
295 aa
AA seq
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MKQQNSSLAVPANALTLAIANPGALGTIDAYISAVNRLPVLTADQESALGRRLRDAGDLD
AARELVLSHLRLVVSIARQYLGYGLPHADLIQEGNVGLMKAVKRFDPERGVRLVSFAVHW
IKAEIHEYIVRNWRLVKVATTKAQRKLFFNLRSMRPDGKTLDTERVDEIARQLNVRPEDV
SEMEVRLSGRDMALEAQDDDDESFAPIAYLSDEGRQEPTRVLERKAHDELQSTGLHDALE
ALDPRSRHIVQARWLQDDGGATLHELAQEYGISAERVRQIEAAALKKMRGSLQPA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacagaattcctcgttggccgtacccgccaacgcgcttacgctggccatcgcc
aatccgggcgcgctggggacgatcgacgcatatatctccgccgtgaaccgcctgccggtg
ctgacggcggatcaggaaagcgcgctcggccgtcgcctgcgcgacgccggcgatctggat
gccgcgcgcgagctggtgctgtcgcacctgcgcctggtcgtgtccatcgcgcgccagtac
ctgggatacggtctgccgcatgcggacctgatccaggaaggcaacgtcggactgatgaag
gccgtcaagcgtttcgatcccgagcgcggggtccggctggtttcgttcgccgtgcactgg
atcaaggcggaaatccatgagtacatcgtgcgcaactggcgcctggtgaaggtcgccacc
accaaggcgcagcgcaagctgttcttcaatctgcgcagcatgcgtccggacggcaagacg
ctggatacggagcgggtggacgaaatcgcccgccagctcaacgtccggccggaagacgtc
agcgagatggaagtccgcctgtccggccgcgacatggccctggaagcccaggacgacgac
gatgaaagcttcgcgcccatcgcctacctgtccgacgaaggccgccaggaaccgacgcgc
gtgctggagcgcaaggctcacgacgagcttcagagcacgggcctgcatgacgcgctggaa
gcactggacccccgctcccgccacatcgtgcaggcgcgctggctgcaggatgacggtggc
gccacgctgcacgagctggcgcaggaatacggcatctccgccgagcgtgtccgccagatc
gaggccgccgcgctgaagaagatgcgcggcagcctgcagccggcctga
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