KEGG   Bordetella genomosp. 8: CAL12_01690
Entry
CAL12_01690       CDS       T09515                                 
Name
(GenBank) RNase adaptor protein RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
bgv  Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:bgv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgv03019]
    CAL12_01690
Messenger RNA biogenesis [BR:bgv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CAL12_01690
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_22 AAA_28 AAA_16 SKI AAA_29
Other DBs
NCBI-ProteinID: ARP84309
UniProt: A0A1W6YTS4
LinkDB
Position
complement(367860..368732)
AA seq 290 aa
MFSVVLITGISGSGKSVALRLLEDSGYTCVDNLPVRFLSDFIASARDDDMARVAVAIDVR
SPGELAELPTTIAALRAVGTRIRVVFLDADTTTLVQRYSESRRRHPLTDRLQRSGKAASL
LDCIRVEREMLAPLRDQEHVIDTSELTPGQLRAWIRDLVQADRQAVVLTFESFAFKRGVP
RDADLVFDVRCLPNPYYDPALRPLTGRDAPVAAYLASFDTVRQMTDDITDFIRKWLPRYM
EDTRSYLTVAIGCTGGQHRSVYVVEQLAQRFADHRPLLVRHRTQLPEEHA
NT seq 873 nt   +upstreamnt  +downstreamnt
atgttcagcgtcgtcctcatcaccgggatatccggctccggcaaatcggtcgccctgcgc
ctgctggaggactctgggtatacctgcgtcgataacctgcccgtacggtttctgtccgac
ttcatcgccagcgcgcgcgatgacgatatggcgcgcgtcgccgtcgcgatcgacgtgcgc
tcgcctggcgaactggcggaactgccgaccaccatcgccgcgctgcgcgccgtgggcacg
cgcatccgcgtcgtgttcctggatgccgacaccaccacgctggtgcaacgctattcggaa
tctcgccgccgccatcctttgacggacaggctgcaacgcagcggcaaggcggcttcgctg
ctcgactgcatccgcgtcgaacgcgagatgctggcgccgctgcgcgaccaggaacacgtc
atcgacacctcggagctgacgccggggcagttgcgtgcctggatccgcgacctggtgcag
gccgaccgccaggcggtggtgctgaccttcgaatccttcgcgttcaagcgcggcgtgccg
cgcgacgccgacctggtgttcgacgtgcgctgcctgcccaacccctattacgatcccgcg
ctgcgcccgctgacgggacgcgacgccccggtggccgcttacctggccagtttcgatacg
gtgcggcagatgacggacgacatcacggacttcatccgcaaatggctgccgcgctacatg
gaagacacgcgcagctatctgaccgtcgcgatcggctgcaccggcgggcagcaccgttcc
gtctacgtcgtcgaacagctggcgcagcgcttcgccgaccaccgccccttgctggttcga
caccgcacccaactccccgaagaacacgcatga

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