Bordetella genomosp. 8: CAL12_03575
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Entry
CAL12_03575 CDS
T09515
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgv03009
]
CAL12_03575
Enzymes [BR:
bgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CAL12_03575
Ribosome biogenesis [BR:
bgv03009
]
Prokaryotic type
rRNA helicases
CAL12_03575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
Vts1
CMS1
EcoRI
Motif
Other DBs
NCBI-ProteinID:
ARP79994
UniProt:
A0A1W6YG83
LinkDB
All DBs
Position
complement(792959..794347)
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AA seq
462 aa
AA seq
DB search
MNDHAFSSLPMQPALLENLQGLGYTQMTPIQAQSLPIILEGRDLIAQAKTGSGKTAAFGL
GLLQHLDVARLVPQALVVCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESL
AGGTHLVVGTPGRIKDHLERGSLDLSGLRTLVLDEADRMVDMGFYDDIVAIAAHCPAKRQ
TLLFSATYPDNIRKLSARFLRNQVEIKVETQHDASHIEQVFYEIDDRERLDAVVTLLNHF
RPVSTLAFCNTKVRSHDLVERLQSAGISAQALNGDLEQRERDEILIQFANQSCAVLVATD
VAARGLDIQNLGAVINVDVTKDTEVHIHRIGRSGRGDQKGLALSLCSPEEMRWANLIEEY
QGAPLKWGDLKSLRAKSDRPLRAPMVTLCIQGGKKDKLRPGDLVGALTGDGGLAFEQVGK
INITEFNAYVALNRQIAKQAYAKVSNSNIKGRRFRMRFLEEF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcacgctttttcatcgctgcccatgcagcccgccctgctggaaaatctgcaa
ggcctgggctacacgcagatgacgcctatccaggcgcaaagcctgcccatcatcctggaa
ggccgcgacctgatcgcccaggccaagaccggcagcggcaagaccgccgcgttcggcctg
ggcctgctgcagcacctggacgtcgcgcgcctggtcccacaggcgctggtcgtctgcccg
acccgagaactggcggaccaggtggcccaggaactgcgccggctggcccggttgattccg
aatgtgaaggtcttgacgctgtgcggcggcgccgccgcgcggccccaggcggaatcgctg
gccggcggcacgcatctggtcgtgggtacgcccggccggatcaaggaccatctcgaacgc
ggcagcctggacctgtccggcctgcggaccttggtgctcgacgaagcggaccgcatggtg
gacatgggcttttatgacgacatcgtcgccattgccgcgcattgtccggccaaacggcag
accctgctgttttccgccacctacccggacaacatccgcaagctcagcgcccgcttcctg
cgcaaccaggtcgaaatcaaggtggagacgcagcatgacgcaagccacatcgaacaggtt
ttctatgagatcgacgacagggaacgcctggacgcggtggtcacgctgttgaaccacttc
cgaccggtctccacgctggcgttctgcaataccaaggtccgcagccacgacctggtggaa
cgcctgcaatcggcgggcatcagcgcgcaggcgctcaacggcgacctggaacagcgcgag
cgcgacgagatcctgatccagttcgccaaccagagctgcgccgtgctggtggcgaccgac
gtcgccgcccgcgggctggacatccagaacctgggcgcggtcatcaatgtggacgtgacc
aaggacacggaagtccacatccaccgtatcggccgcagcggccgcggcgaccagaagggc
ctggcgctcagcctgtgctcgcccgaggaaatgcgctgggccaacctcatagaggaatac
cagggcgctccgctgaaatggggcgacctgaaatcgctgcgggcaaaatccgatcgccca
ttgcgggcccccatggtgaccctgtgcatacagggcggcaagaaggacaagctgcgtccg
ggagacctggtgggcgccttgaccggcgatggcggcctggcattcgaacaggtcggcaag
atcaacattaccgagttcaatgcctatgtggccttgaaccgccagatcgccaagcaggcc
tacgccaaggtctcgaacagcaatatcaaggggcggcggttccgcatgcggttcctggaa
gaattctga
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