Bordetella genomosp. 8: CAL12_04875
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Entry
CAL12_04875 CDS
T09515
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgv03016
]
CAL12_04875
Enzymes [BR:
bgv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CAL12_04875
Transfer RNA biogenesis [BR:
bgv03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CAL12_04875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ARP80227
UniProt:
A0A1W6YGN4
LinkDB
All DBs
Position
complement(1071511..1072953)
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AA seq
480 aa
AA seq
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MQETILARDGALAPASADASPSLSAGPDSDTPRKLFIRTFGCQMNEYDSDKMVDVLRESQ
GVELTDTPEDADIILFNTCSVREKAQEKVFSDLGRVQQLKKAKPGLVIGVGGCVASQEGE
AIVKRAPYVDVVFGPQTLHRLPELIRQREAEGRAQVDISFPSIEKFDSLPPPRVDGATAF
VSIMEGCSKYCSFCVVPYTRGDEVSRPFDDILVEIADLADQGVKEVTLLGQNVNAYRGRL
GDGDEIADFAMLLEYVHDIPGIERIRYTTSHPKEMTPRLIEAYARLPKLVSFLHLPVQAG
SDRVLAAMKRGYTTLEFKSIVRRLREARPGLTLSSDFIVGFPGETEEDFEKTMKLIDDVG
FDTSFSFVYSRRPGTPAADLADDTPQTLKLQRLQRLQARIAEQASAISRAMVGTTQRVLV
EGPSRRDPNELMGRTENNRIVNFAAPPRLIGHMVDIVITEAYPNSLRGRVAVSGDTGEAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaccatactcgcgcgcgacggcgcactggcgccggcgtccgccgacgcttcc
ccttccctgtccgctggcccggattccgatacgccccgcaaattgttcatccgcaccttc
ggttgccagatgaacgagtacgactccgacaaaatggtggacgtactgcgtgaatcgcag
ggcgtcgagctgaccgacacgccggaagacgcggacatcatcctgttcaacacctgttcc
gtgcgcgaaaaggcgcaggaaaaagtgttctccgaccttggccgcgtgcagcagctcaag
aaggccaagcccgggctggtcatcggcgtcggcggctgcgtggccagccaggaaggcgaa
gccatcgtcaagcgcgccccgtacgtcgacgtggtgttcggtccgcagaccctgcatcgg
ctgccagagctgatccgccagcgcgaggccgagggccgcgcccaggtggacatcagcttt
cccagcatcgaaaaattcgactcgctgccgccgccgcgcgtcgacggcgcgaccgccttc
gtgtccatcatggaaggctgcagcaagtactgcagcttctgcgtcgtaccctacacccgt
ggcgacgaagtctcgcggcccttcgacgacatcctggtcgagatcgccgacctggccgac
cagggcgtgaaggaagtcacgctgctgggccagaacgtcaatgcctaccgcggccgcctg
ggcgatggcgacgagatcgccgatttcgccatgctgctggaatacgtgcatgacattccc
ggcatcgaacggatccgctacacgacctcgcaccccaaggagatgacgccgcggctgatc
gaggcctatgcccggctgcccaagctggtgtccttcctgcatctgccggtccaggcgggc
agcgatcgcgtactggcagcgatgaagcgcggctacaccacgctggaattcaagtccatc
gtgcgccgcctgcgcgaggcgcgccccggcctgaccctgtcgtccgacttcatcgtcggc
ttccccggggaaacggaagaagacttcgagaaaaccatgaagctgatcgacgacgtcggc
ttcgacacctcgttttccttcgtctactcgcgccgtcccggtacgccggcggcggacctg
gccgacgatacgccacagaccctcaagctgcagcgcctgcagcggctgcaggcgcgcatc
gccgaacaggcgtcggcgatcagccgcgccatggtcggcaccacccagcgcgtgctggtc
gaaggaccttcgcgccgcgatccgaatgaactcatgggccgcacggaaaacaaccgcatc
gtcaatttcgccgcgccgccgcggctgatcggccacatggtcgacatcgtcatcaccgag
gcctatcccaactccctgcgcggacgggtggcggtctccggcgacaccggggaggccgcg
taa
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