Bordetella genomosp. 8: CAL12_05435 Help Entry CAL12_05435       CDS       T09515                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism bgv  Bordetella genomosp. 8 Pathway bgv03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:bgv00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     CAL12_05435  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bgv03400]     CAL12_05435 DNA repair and recombination proteins [BR:bgv03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      CAL12_05435   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       CAL12_05435 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter SMC_N AAA_29 AAA_21 AAA_16 nSTAND1 UvrA_DNA-bind RsgA_GTPase AAA_18 AAA_22 AAA_25 Viral_helicase1 NACHT nSTAND3 AAA_33 AAA_23 ATPase DUF4350 DnaJ_CXXCXGXG Anti-TRAP Motif Other DBs NCBI-ProteinID:  ARP80328 UniProt:  A0A1W6YH42 LinkDB All DBs Position complement(1195764..1201580) Genome browser AA seq 1938 aa AA seqDB search MTSEIRIVGARQNNLKNLDVSFATGEFVVVTGVSGSGKSSLAFDTLYAEGQRRYVETFSP YARQFLDRMDKPQVDRIEGILPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARGARLY CRGCGTLVRRDTADSIFRSLRERSAGADDRRLVVTFPIKVPANFTEDEVRGFLEQQGYTR VHAQEGEPAASEAEGPTVEATAKKSKSKSAKAKAGAGAPAQALRVLHVVQDRFRFGSVER ERAMEALDTALRMGAGHLSVHVLDDDGKDAQVWKYSDRLHCADCDIEYTDPLPSSFSFNS PLGACEACRGFGRVIGIDFGLVVPDENKTLLEGAIKPWQTASYSECQDDLRKYAPKAGVP LSVPWKSLTPEQRDWVLHGDPEFKGGSQAWKTQWYGVQRFFAWLETKAYKMHVRVLLSKY RSYTPCPVCHGSRLKPDALLWRVGSKEEADMVLPPDDGRYKRFKPVQANWSDELLHLLDG LSIHDLMLLPIERVRTFFDTLGFVGVLDAATDLLLTEVRARLKFLCDVGLGYLTLDRQSR TLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMHRVVEVMHRLRDAGNTLVVVE HDPQVMVAADRVIDIGPGPGERGGHIVFDGTPAQLRKARTLTGDYLGGRQRVEAPRPMPV AANTPRLLLEGVNAHNLKNVSVEIPLGRLVCVTGVSGSGKSTLVQDVLYPALLKLKGRPS EAPGAHARLLGAEQITDVVMVDQAPIGKTARSNPASYVGAFEAIRKLFAQAPVSKERSYT AGMFSFNSGEGRCPTCGGTGFEHVEMQFLSDVYLRCPDCDGKRFRPEVLQVRVEHLGKSA SIDEVLDMTVSEAIEFFKGLRDVQTGLAPLADVGLEYVRLGQPVPTLSGGEAQRLKLAGH LAEAARSGISTAKVAKKGSLFLFDEPTTGLHFDDVARLMRAFRQLLAAGHTLLIIEHNLD VIRAADWLLDLGPEGGDAGGLLVGVGTPADLMKNPASHTGAALRDYEDAIVPAARETAAA TVLAEPALAYGYGDGNGGDDDDVGGILASRDDVDADAGTPLQTAVRRRATQAIEIRNARE HNLKNVNVEIPRDKFTVITGVSGSGKSTLAFDILFNEGQRRYLESLNAYARAIVQPAGKP DVDAIFGIPPTVAIAQRTSRGGLKSTVATMTEIHHFLRLLYVKLGVQYSPDYNVPVEPQT PDQIVARIMRDRMGQHIGILAPLVMARKGYYTDLAKWAGGKGHTHLRVDGVFTPVSPWPR LDRYREHTIELPVADIQVNAANEPALRDAIKRALEYGQGALSVLWPLDNLRDNPDTPLEQ AHFSTKRTCPISGVSFPELDPRMFSYNSKHGWCPTCYGAGVVIPEFDEEQSGEESAWIDG SGEAQVCPACHGQRLNRVALAVRWRDRNIAQLAGMAVSEAHTFFEGLVLRGREAEIARDI LQEIRSRLNFMKEVGLDYLALDRSAPTLSGGEAQRIRLAAQLGSNMQGVCYVLDEPTIGL HPRDNRILLDALSKLEGNGNTLVVVEHDDDTIRRAAHIIDIGPGAGVRGGRVVAQGTAQD VIDAPDSVTGRYLAHPLQHPLQGRRPVDKDTAFIEVRNAHLHNLRNVTARLPIGRLSVVT GVSGSGKSTLAREVLLDNLLQAVSQGQAPAWKGCTAINGWEVLDRVLEVDQTPIGKTPRS CPSTYIGFWDEVRKQFADTREARMRGWTPARFSFNTGDGRCPICEGQGMRTIEMNFLPDV KVPCDACNGARFNADTLSVQLRGKHAGEVLAMEVDDALAYFEAHPKVRRPLQLMQDVGLG YLTLGQPSPTLSGGEAQRIKLVTELSKARLTEGVITTGRASRAPHTLYVLDEPTVGLSMA DVEKLIHVLHRLVEAGNTVVVIEHNLDVIAEADWLLDLGPEGGTGGGQLVAQGSPEDVMA LRDRSHTGRVLAEFLERQ NT seq 5817 nt NT seq  +upstreamnt  +downstreamnt atgacatccgaaatccgcattgttggcgctcgccagaacaacctgaaaaacctggacgta tcgttcgccaccggcgaattcgtcgtcgtcaccggcgtatccggctcgggcaagagctcg ctggccttcgataccctttatgccgaagggcagcggcgctacgtcgagacgttctccccc tacgcccgccagttcctcgaccgcatggacaagccgcaggtcgatcgcatcgaaggcatc ctccccgccatcgcgatcgaccagaccaatcctgtgcgcagctcgcgcagcacggtcggc accatgacggagctgaacgatcacctgaagctgttgttcgcgcgcggcgcccgcctgtac tgccgcggctgcggcaccctggtgcgccgcgacaccgccgattccatcttccgctcgctg cgcgaacgcagcgccggggcggacgaccggcggctggtggtgaccttccccatcaaggtc cccgccaacttcaccgaagacgaagtgcgcggtttcctggaacagcagggctatacccgc gtgcacgcgcaggaaggcgaacccgccgcgtccgaggccgaaggcccgacggtcgaggcc accgccaaaaagagcaaatccaaaagcgccaaggccaaggcgggcgcgggtgcgcccgcc caggcgctgcgggtgctgcacgtggtgcaggatagattccgcttcggatcggtggagcgc gagcgggcgatggaagccctggacaccgccctgcgcatgggcgcgggccacctgtcggtg cacgtgctcgatgacgacggcaaggacgcccaggtctggaagtacagcgatcggctgcac tgcgccgactgcgacatcgaatacaccgatcccttgcccagttcgttttcgttcaattcg ccgctgggcgcatgcgaagcctgccgcggcttcggccgcgtcatcggcatcgacttcggc ctggtcgtgcccgacgaaaacaagaccctgctggaaggcgccatcaagccctggcagacc gccagctacagcgaatgccaggacgacctgcgcaagtacgcacccaaggccggtgtgccc ttgtcggtgccctggaaaagcctgacgcccgaacagcgcgattgggtcctgcatggcgat cccgaattcaagggcggcagccaggcatggaaaacgcagtggtatggcgtgcagcgcttt tttgcctggctggaaaccaaggcctacaagatgcacgtgcgcgtgctgctgtccaagtac cgcagctacacgccctgccccgtttgccatggttcgcggctgaagccggacgcgctgctg tggcgcgtgggcagcaaggaagaagcggacatggtgctgccgccggacgacggccgctac aagcgtttcaagccggtgcaggccaattggtccgatgaactgctgcatctgctggacggc ctgtccatccatgacctgatgctgctgcccatcgaacgcgtgcgtaccttcttcgacacg ctcggcttcgtcggcgtgctggacgccgccaccgacctgttgctgacggaagtgcgcgcg cgcctgaaattcctgtgcgacgtggggctgggctatctgacgctggaccgccagagccgc accctgtcgggcggcgaagtgcaacgcatcaacctgaccacggcgctgggcacctcgctg gtgaacaccctgttcgtgctggacgagccttccatcggcctgcatccgcgcgacatgcat cgggtggtcgaggtcatgcatcgcctgcgcgacgccggcaatacgctggtggtggtggag cacgacccgcaggtcatggtcgcggccgaccgcgtcatcgatatcggccccggtcccggc gaacgcggcgggcatatcgtgttcgacggcacgcccgcgcagctgcgcaaggcgcgcacg ctgaccggcgactacctgggcgggcgccagcgcgtcgaagcgccgcgccccatgccggtg gccgccaacacgccgcggctgctgttggaaggcgtcaacgcccataacctgaagaacgtt tccgtcgagatcccgctgggccggctggtgtgcgtcaccggcgtgtccgggtcgggcaag tccacgctcgtgcaggacgtgctctatccggcgctgctcaagctcaagggccggccttcg gaagcccccggcgcgcatgcgcgcctgctgggcgcggaacagatcaccgacgtcgtcatg gtcgaccaggcgcccatcggcaagaccgcgcggtcgaatccggccagctatgtcggcgcc ttcgaggcgatacgcaagctgttcgcgcaggcaccggtctcgaaagagcgcagctatacc gccggcatgttcagcttcaacagcggcgaaggccgctgtcccacctgcggcggcacgggc ttcgaacacgtcgagatgcagttcctgtccgatgtctacctgcgctgccccgattgcgac ggcaagcgcttccgtccggaagtgctgcaggtgcgcgtcgaacacctgggcaagagcgcg tcgatagacgaagtgctggacatgaccgtcagcgaagccatcgagttcttcaagggcctg cgcgacgtgcagaccggcctggcgcccctggccgacgtcggcctggaatacgtgcgcctg ggccagccggtgccgaccctgtcgggcggcgaggcgcagcgcctgaagctggcgggccac ctggcggaagccgcgcgcagcggtatttccacggccaaggtcgccaagaaaggcagcctg ttcctgttcgacgagcccaccaccggcctgcatttcgatgacgtcgcgcggctgatgcgg gccttccggcaactgcttgccgcgggccacacgctgctgatcatcgaacacaacctggac gtgatccgcgcggccgattggctgctggacctgggtccggaaggcggcgatgccggcggc ctgctggtaggcgtgggcacgcccgccgacctgatgaagaatcccgcgtcgcacacgggc gcggccttgcgcgactatgaggacgccatcgtaccggcggcacgcgaaaccgccgccgcc acggtcctggcggagccggcgctggcctatggctatggcgacggcaatggcggcgacgat gatgacgtcggcggcatcctcgcgtcgcgcgacgatgtggacgccgatgccggcacgccg ctgcagacggctgtgcgtcgtcgcgccacgcaggccatcgaaatccgcaacgcacgcgag cacaacctgaagaacgtcaacgtcgagatcccgcgcgacaagttcacggtgatcaccggc gtatccggctccggcaagtccacgctagccttcgacatcctcttcaacgaaggccagcga cgctatctggaatccctgaacgcctacgcccgcgccatcgtgcaaccggccggcaagccg gacgtcgatgcgatcttcggcattcctccaaccgtcgccatcgcgcagcgcaccagccgc ggcggattgaagtccaccgtggccacgatgacggaaatccatcatttcctgcggctgctg tacgtcaagctgggcgtgcagtattcgccggactacaacgtgccggtggagccgcagacg ccggaccagatcgtcgcgcgcatcatgcgcgaccgcatgggccagcacatcggcatcctg gcgcccctggtcatggcgcgcaagggctactacaccgacctggcgaaatgggccggcggc aagggccatacgcatctgcgggtggacggcgtgttcacgcccgtcagcccctggccgcgc ctggaccgctaccgcgagcacacgatcgaactgccggtggcagacatccaggtcaatgcc gccaatgaacccgcgctgcgagatgcgatcaagcgcgcgctggaatacggccagggcgcc ctgagcgtgctgtggccgctggacaacctgcgcgacaaccccgataccccgctggagcag gcgcacttctccaccaagcgcacctgcccgatcagcggcgtcagcttccccgagctggat ccgcgcatgttctcgtacaactccaagcacggctggtgccccacctgctacggcgcgggc gtcgtcatcccggaattcgacgaagaacagagcggcgaggaaagcgcctggatcgacggt tcgggcgaagcccaggtctgcccggcctgccatggccagcgcctgaaccgcgtggccctg gccgtgcgctggcgcgaccgcaacatcgcccagctggccggcatggcggtcagcgaagcc cataccttcttcgagggcctggtgctgcgcggccgcgaggccgaaatcgcgcgcgacatc ctgcaggaaatccgcagccgcctgaacttcatgaaggaagtcggcctggattacctggcc ctggaccgttcggcgcccacgctgtcgggcggcgaggcgcagcgcatccgcctggccgcg caactgggatccaacatgcagggcgtgtgctacgtcctggacgagcccaccatcggcctg catccgcgcgacaaccgcatcctgctggacgccttgagcaagctggaaggcaacggcaac acgctggtggtggtcgagcacgatgacgacaccatacggcgcgccgcgcatatcatcgac atcggtcccggcgccggcgtgcgcggcggccgcgtggtggcccagggcacggcgcaggac gtcatcgatgcgccggattcggtcaccggtcgctacctggcgcatccgctgcagcatccg ctacagggccgccggccggtcgacaaggacaccgccttcatcgaagtgcgcaatgcccat ctgcacaacctgcgcaacgtcacggccaggctgccgatcggccggctcagcgtggtgacc ggcgtttccggctccggcaaatccaccctggcgcgcgaagtcctgctggacaacctgctg caggcggtctcgcaaggccaggcgcccgcctggaagggctgcaccgcgatcaacggctgg gaagtgctggaccgcgtgctcgaagtggaccagacgcccatcggcaagacgccgcgctcc tgccccagcacctatatcggtttctgggacgaggtgcgcaagcagttcgccgacacgcgc gaagcccgcatgcgcggctggacgccggcgcgcttttccttcaacaccggcgacggccgc tgcccgatctgcgaaggccagggcatgcggacgatagaaatgaacttcctgccggacgtg aaggtgccctgcgacgcctgcaacggcgcgcgcttcaacgcggacacgctgtccgtgcag ttgcgcggcaagcatgccggcgaagtgctcgccatggaagtcgacgacgcgctggcctat ttcgaggcccatcccaaggtgcgccggccgctgcaactgatgcaggacgtcggcctggga tacctgacactggggcagccttcgcccacgctgtcgggcggcgaggcgcagcgcatcaag ctggtgacggaactgtccaaggcgcggctgacggaaggcgtcatcaccactggacgcgcg tcgcgcgcgccgcatacgctatacgtgctggacgaacccacggtcggcctgtcgatggcg gacgtggaaaaactcatccacgtcctgcatcgtctggtggaagccggcaataccgtggtg gtcatcgagcacaacctcgacgtcatcgcggaagccgactggctgctggacctgggcccc gaaggcggcaccggcggcggccaattggtcgcccagggatcgccggaggacgtcatggcg ctgcgcgaccgctcgcacaccggccgggtcctggccgagttcctggagcggcagtag

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