Bordetella genomosp. 8: CAL12_06465
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Entry
CAL12_06465 CDS
T09515
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv03030
DNA replication
bgv03430
Mismatch repair
bgv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAL12_06465
03430 Mismatch repair
CAL12_06465
03440 Homologous recombination
CAL12_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgv03032
]
CAL12_06465
03400 DNA repair and recombination proteins [BR:
bgv03400
]
CAL12_06465
Enzymes [BR:
bgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAL12_06465
DNA replication proteins [BR:
bgv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAL12_06465
DNA repair and recombination proteins [BR:
bgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAL12_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
DNA_pol3_tau_5
AAA_22
AAA_16
AAA_14
AAA_18
AAA_2
TsaE
AAA_5
DUF3646
nSTAND3
AAA_19
RsgA_GTPase
Rad17
AAA_assoc_2
PIF1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ARP80511
UniProt:
A0A1W6YHJ4
LinkDB
All DBs
Position
1416504..1418996
Genome browser
AA seq
830 aa
AA seq
DB search
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCETGVTSKPCGVCQACTEIDAGRFVDYLELDAASNRGVDEMTQLLEQAVYAPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
DAIVGHLRQVLGDEQLAFEVPALRLIAQAASGSMRDALSLTDQAIAYSAGNLTEEAVRGM
LGTIDQRHLVRLLDALGAGDARAVLAVADELATRGLSYGGALADLAGLLSRVAIEQRVAG
AISSDDPLAADIARLAHSLHPDALQLFYSVAVHSRGELALAPDEYAGFVMACLRMLSLSG
DAGPHMLPATPPATNANAPAAMAAGAAPAATQAAAPAAMAPAVAAPAASVPSSVAAPAAS
APPSVAAPAAAVPSSIAAPAAAVSPSVPAPAAQVPSAAAAPAAVAAPSVAPTPSANAETP
PPEAGAGSAAVSTPSSDSAAPPAVGAPRSSTATLAATPPASAVAPRRAPGAGVAPWEDAP
AGIAPAVPEPAAPKPAAPEPATPEPAAPVTTDAAAGGRAAPTPATPTPATPTSDAPAVTD
AAAAHRATPTPAAPATAAQQAPDDGPPAWVDEAIPDDAEGGYESFSGSAGEGFIASPDDD
DFETMAMGPGTAAPAPLAPARRAPAARAASRRAPRVADMSESNWPELAARLPVTGLAAEL
ARQSEWQGVQGDTVILRVAVRTLADSASRVRLQTVLCEHFGQSLRLDVLVGATGDATAHA
VAQQERAERQKAAEAAVDADPFVQALLSDFGGQVVPGSIRHVDPPAAAAR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgacctatctcgtattggcccgcaagtggcggccacgttcgttcgataccctggtcgga
caggatcatgtggtgcgcgccctgacgcatgcgctggacacccagcggctgcaccatgcc
tggctgttcaccggcacgcgcggcgtcggcaagaccacgctgtcgcgcatactcgccaaa
tccctgaattgcgaaacgggcgtgacgtccaagccgtgtggcgtgtgccaggcttgtacc
gagatcgacgcggggcgtttcgtcgactacctggagctcgacgcggcgtccaatcgcggt
gtcgacgagatgacgcagctgctggagcaggccgtgtacgcgccgggagcagggcgcttc
aaggtctacatgatcgacgaagtgcacatgctcacgggccacgccttcaatgcgatgttg
aagacgctggaagagccgccgccgcacgtcaagttcatcctggcgacgaccgatccgcag
aagattcccgtcacggtgctgtcgcgctgcctgcagttcaacctgaagcagatgccgccg
gatgccatcgtggggcatctgcgccaggtgctgggggacgagcagcttgccttcgaggtg
ccggcgctgcggctgatcgcgcaggcggcttcgggctccatgcgggatgccctgtcgctg
accgatcaggcgatcgcctacagcgccggcaatctgaccgaagaagccgtgcgcggcatg
ctggggaccatcgatcagcggcatctggtgcgcctgctggatgcgctcggcgccggcgat
gcgcgggcggtgctggcggtggccgatgagcttgccacccgtggcctgtcgtatggcggg
gcgctggcggacctggccgggctgttgtcgcgcgtggccatcgagcagcgcgtggcgggc
gcgatttcctcagatgatccgctggcggccgatatcgcgcgcctggcgcacagtctgcat
ccggatgcgcttcagctgttttattcggtcgcggtacatagccgtggcgaattggcgctg
gcgccggacgagtatgcgggtttcgtgatggcttgcctgcgcatgctgtcgctcagcggc
gatgccgggccgcacatgctgccggccacgccgccggcaacgaatgcgaacgcgccggcc
gccatggccgcgggtgccgcgcccgcggcaacgcaggcagccgcgcccgcggcgatggcg
cccgccgtcgcggcgccagcagcatcggtgccgtcctccgtcgcggcgccagcggcatcg
gcgccgccttccgtcgccgcgcccgcggcagctgtgccgtcttccatcgccgcgcccgcg
gcagcggtatcgccgtccgttcccgcgccggcggcgcaggtgccttctgctgcagccgcc
ccggcggcggtggccgcgccatccgtggcgcccacgccgtccgcgaacgccgaaacgccc
ccgcctgaggcaggcgccggctcggccgccgtatcgaccccatcttccgattccgccgcg
ccgccggccgtgggcgcgccgcgttccagcacggccaccctggccgcgacgccgccggct
tccgcggtcgcgccgcgccgcgcgcctggcgcgggtgtcgcgccgtgggaggacgctccc
gccgggatcgcgccagccgtgcctgaaccggctgcgcctaagccggccgcgccagagccg
gccacgcctgagccggccgcccccgtcaccacggacgccgccgctggcggccgcgccgcg
cctacgccggccacgcctacgccggccacgccgacctcagacgcgcctgccgtcacggac
gctgccgctgcacaccgcgccacgccgaccccggccgcgccggcgaccgcggcgcagcaa
gcgcccgacgacggtccgccggcctgggtcgacgaggccattcccgacgacgccgaaggc
ggctacgaatccttctccggctcggcgggcgaaggcttcatcgccagcccggatgacgac
gatttcgaaaccatggccatggggccaggaacggccgcgccggcgcccctcgccccggcg
cgacgtgcgccggcggcgagggccgcgtcgcgccgcgcccctcgcgtggccgatatgtcc
gaatccaattggcctgagctggccgcccgcctgcccgtcaccggcctggccgccgaactg
gcgcggcaaagcgaatggcagggcgtgcagggcgacaccgtcatcctgcgcgtggccgtc
cgcacgctcgccgacagcgccagccgcgttcgcctgcaaacggtattgtgcgaacacttc
ggccagagcctgcgcctggatgtcctggtcggcgccacgggcgacgccacggcgcacgcg
gtggcccagcaggaacgggccgagcggcagaaggcggcggaggccgccgtcgacgccgat
cctttcgtgcaagccctgttatccgatttcggcggccaggtggtgcccggctccatccgc
cacgtcgatccaccggccgcggccgcccgctga
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