KEGG   Bordetella genomosp. 8: CAL12_06920
Entry
CAL12_06920       CDS       T09515                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bgv  Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:bgv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgv03400]
    CAL12_06920
Enzymes [BR:bgv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CAL12_06920
    5.6.2.6  RNA 3'-5' helicase
     CAL12_06920
DNA repair and recombination proteins [BR:bgv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CAL12_06920
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ARP80590
UniProt: A0A1W6YHQ5
LinkDB
Position
1510193..1512799
AA seq 868 aa
MERHAAARRTEARLEQWFAERGWKSAPFQRETWHRYLDGESGLLHTPTGSGKTLAAFGGP
LLEALANTPADAPADASADASVNRPGTRQALGDGPKVLWVTPLRALAADTSRALTEITQA
VQLPWTVALRTGDASARDKRLARQGKADVLIITPESLALLLSYADTAPRFKALRCIVVDE
WHELLGNKRGVLLQLCLARLRRLSPGVRIWGLSATLGNLDEARAVLLPHATPSALVAGAR
PRRIRISTLLPPRDGGLPWAGYLGLSQLPRVFKRLFDVRASLLFTNTRAQAELWHRALES
IWPEDPSTLALHHGSLDARLRAGTEHGLREGRIRCVVATSSLDLGVDFPAVDQVLQVGSP
KGVARLMQRAGRARHRPGESGQVVCVPAQALDLIEYAAARQAIERGEIESRPPPRGSLDV
LAQHAVTLALGGGFQAHDLYREVRDTHAYADLDAATWQAVLDFIVQGGRALGSYPEFRRV
DIDEDGTYRVHDRRIALRHRLSIGTITADGAVAVKYLRGGSLGSVEEGFLARLRPGDRFQ
FAGRTLQLARLEGMTAYVRRAKGGDGPVATWLGGRMPLSTQLAHEVEALYGQADDEAEEK
ANGEARSKGANEAGNKAEPAAPEMRAAEPLLRILRHIGALPGRGRLVAEQVGSRKGMHLF
LYPFAGRFVHEGLAAMMALRWGRLRANTFSYTVNDYGLMLTLAEPAELDESLLRRLLRVE
GMEADLSEGVNLGELARRQFREIARVAGLLTPSFPGRELRSLRQVQASSGLLYDVLRRYD
PDHLLLAQAEREVFDIQLEAPRLRATLRDCEDRTLVLRNPGAFSPLSFPLWMESLRGQLS
TETWQARVKRAAAQLEKRYERVARASIA
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggaacgacacgcggccgcgcgccggacggaagctcgcctggagcaatggttcgccgag
cgcggatggaagtccgcacccttccagcgcgagacctggcatcgctacctggacggtgag
tcgggcctgctgcacacgcccacgggcagcggcaagaccctggctgcattcggcgggccc
ttgctggaagcgctggccaatacgcctgccgacgcgcccgccgatgcgtccgccgatgcg
tccgtcaacaggcctggaacacggcaggccttgggcgacggtcccaaggtgctgtgggtc
acgccgctgcgcgcgctggccgccgacacttcgcgcgccctgaccgaaatcacccaggcc
gtgcagcttccgtggacggtggcgctgcgcaccggcgacgccagcgcgcgcgacaagcgc
ctggcgcggcaaggaaaggcagacgttcttatcatcacgcccgagtcgctggccctgctg
ctgtcgtacgccgacaccgccccgcgcttcaaggccttgcgctgcatcgtagtggacgag
tggcacgagctgttgggaaacaagcggggcgtgctgctgcagctatgcctggcgcggctg
cgccgcctgtcgccaggcgtgcgcatctggggcctgtcggcgaccctgggcaacctggac
gaagcgcgcgccgtgctgttgccgcatgcgacgcccagcgcgctggtggccggcgcccgc
ccgcgacgtatacgcatctccacgctgctgccgccgcgcgatggcggcttgccctgggct
ggctatcttggcctgtcgcagttgccgcgagtgttcaagcgcctattcgacgtacgcgcc
agcctgctgttcaccaacacgcgcgcgcaggccgaactgtggcaccgtgcattggagtcc
atctggccggaagatccgtccacgctggcgttgcatcatggttcgctggacgcgcgcctg
cgggccggcaccgaacatggcctgcgcgaaggccgcatacgctgcgtggtggcgacttcc
agcctggacctgggcgtggacttcccggcggtggaccaggtcctgcaggtcggcagtccc
aagggcgtcgcacggctgatgcagcgcgcgggccgggccaggcatcggccgggcgaatcc
ggccaggtggtctgcgtgccggcgcaggcgctggacctgatcgagtatgccgccgcccgc
caggcgatcgaacgcggtgaaatcgagtcgcgtccgccgccgcgcggcagcctggacgtg
ctggcgcagcatgccgtgacgctggccctgggcggcggtttccaagcccacgacctgtat
cgtgaagtccgcgatacccatgcctatgccgacctggatgccgccacctggcaggccgtg
ctggatttcatcgtgcagggcggccgcgccttgggcagctaccctgagttccgccgggtc
gacatcgacgaagacggcacataccgcgtgcacgatcgccgcatcgcgctgcgccatcgg
ctgtccatcggcaccatcaccgccgacggcgcggtcgccgtcaagtatctgcgcggcggc
agcctgggctcggtggaagagggcttcctggcgcggctgcgtcccggcgaccgtttccag
ttcgccggccgcacgctgcaactcgcgcggctggaaggaatgaccgcgtacgtgcggcgg
gccaagggcggcgacggccccgtggcgacctggctgggtggccgcatgcccttgtccacg
cagctcgcgcacgaagtggaagccttgtatggacaggcagacgacgaggccgaagaaaag
gccaacggcgaggccaggagcaagggcgcgaatgaagcagggaataaggccgaacccgcc
gcgccggaaatgcgcgccgccgaacccttgctgcgcatcctgcgccacatcggcgcgctg
cccgggcgtggccgcctggtggccgagcaggtgggttcgcgtaaaggcatgcatcttttt
ctctatccctttgccggccgtttcgtgcacgaaggcctggcggcgatgatggcgctgcga
tggggcaggctgcgggccaacaccttttcctataccgtcaacgactatggcctgatgctg
acactggccgagccggcggaactggacgagtccctgttgcggcgcttgctgcgtgtcgaa
ggcatggaggccgatctgagcgaaggcgtgaacctgggcgagctggcgcgccggcagttt
cgcgaaatcgcccgcgtcgccggcctgctgacgccgtcgtttcccggcagggagctgcgt
tcgctgcgtcaggtccaggcgtccagcgggctgctgtatgacgtgttgcggcgctacgat
ccggaccatctgctgctggcgcaggccgagcgcgaggtcttcgacatccagctggaagcc
ccgcggctgcgggccaccctgcgcgattgcgaggatcgcaccctggtgctgcggaatccg
ggcgcgttcagcccgctgtctttccctttgtggatggagagcctgcgcggccagctcagt
accgaaacctggcaggcgcgcgtcaagcgcgcggccgcgcaactggagaagcgctatgaa
cgcgtcgcccgggcaagcatcgcctga

DBGET integrated database retrieval system