Bordetella genomosp. 8: CAL12_17185
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Entry
CAL12_17185 CDS
T09515
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAL12_17185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgv03400
]
CAL12_17185
DNA repair and recombination proteins [BR:
bgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAL12_17185
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAL12_17185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
DUF7125
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARP82380
UniProt:
A0A1W6YMR1
LinkDB
All DBs
Position
complement(3773285..3775312)
Genome browser
AA seq
675 aa
AA seq
DB search
MTDTGFVEFPDSPFQLYQPYPPAGDQPGAIGALVDGVRDGLMYQTLLGVTGSGKTYTMAN
VIARLGRPALVLAPNKTLAAQLYAEMREFFPKNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRAGDRISRRE
ILARLVAMQYTRNDADFTRGVFRVRGETIDIFPAESPELALRATLFDDEVETLELFDPLT
GKVRQKVPRFTVYPGSHYVTPRDTVLRAIETIKEELRERLQFFTSQSKLVEAQRLEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMY
RGDRARKETLVQYGFRLPSALDNRPLQLQEFEARMRQCVFVSATPSNYEQEHADNVVEQV
VRPTGLVDPIVEVRPARTQVDDLLGEIKLRVAQSERVLVTTLTKRMAEDLTDFLAEHGVR
VRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNINGRAILYADRVTDSMHRAIGETERRRKKQEEFNLAHGITARGVQKA
VRELIDGVVAPIQHPTIEDALPAELLTDEKALAREIRRLEKSMMDHARNLEFEQAAAARD
ALNALKERVLLDGAR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacactggattcgtcgaatttccggatagtccttttcagctctatcagccgtat
ccgccggctggcgaccagcctggcgccataggagccctggtggatggcgtgcgggacggc
ctgatgtaccagactctgctgggcgtcaccggctccggcaagacctacacgatggccaac
gtcatcgcccgcctggggcggccggcgcttgtgctcgcgccgaacaagacactggcggcg
cagttgtatgccgaaatgcgcgagttctttcccaagaacgcggtcgagtattttgtttcg
tactacgactactatcagcctgaggcctacgtgccgacgcgcgatctgtttatcgaaaag
gactcgtccatcaacgagcatatcgagcagatgcggctgtcggccacgaaaagcctgctg
gagcgccgcgatacggtcatcgtcggcaccgtgtcgtgtatttacggtatcggcaatcct
ggcgattaccacgccatggtactcatcctgcgcgcgggcgatcgcatatcgcggcgcgag
atcctggcgcgcctggtggcgatgcagtacacgcgcaacgatgcggacttcacgcgcggg
gtgtttcgggtgcgcggcgaaaccatcgacatcttcccggcggaaagccctgaactcgcc
ttgcgcgcgacgctgttcgacgatgaagtcgaaacgctggaattgttcgatccattgacg
ggcaaggtgcggcaaaaggtgccgcgctttacggtctatcccggatcgcactacgttacg
ccgcgcgataccgtgctgcgggcgatcgaaaccatcaaggaagagctgcgcgagcggctc
cagtttttcacctcgcagagcaagctggtggaagcccagcggctggaacagcgcacgcgg
ttcgatctggaaatgctgcaggagctggggttctgcaagggcatcgaaaactattcccgt
catttgtccggcgccgccccgggcgagccgccgcccacattgatcgattacctgcccgcc
gatgcgctcatgttcatcgacgaaagccacgtgacgatcggccagctgggcgggatgtac
cgtggcgaccgcgcgcgcaaggaaaccctggtgcaatatgggttccgcctgccttccgcc
ctggataaccggccgctgcagctgcaggaattcgaagcccgcatgcgccagtgcgtattc
gtatccgcgacgccgtcgaattatgaacaggagcacgccgacaacgtggtcgagcaggtc
gtccggcccaccggattggtcgaccccatcgtggaggtacgccccgcgcgtacccaggtg
gacgatctcctgggcgaaatcaagctgcgcgtggcccagtccgagcgcgtcctggtgacc
acgctcaccaagcgcatggccgaagacctgacggacttcctggccgagcacggagtgcgg
gtgcggtatctgcattcggatatcgatacggtggaacgggtggaaatcatccgcgacctg
cgcctgggcaccttcgacgtcctggtcggcatcaacctgctgcgggaaggcctggatata
ccggaagtgtccctggtcgccatcctggacgccgacaaggaaggcttcctgcggtccgag
cgcagcctgatccagaccataggccgggcggcgcgcaatatcaacggcagggccattctc
tacgccgaccgggtcacggattccatgcatcgcgccatcggcgaaacggagcgccggcgc
aagaagcaggaggaattcaacctggcccacggcattaccgcccgaggcgtgcagaaggcc
gtccgcgaactgatcgacggcgtggtggctccgatccagcaccccacgatcgaggatgcg
ttgccggcggagctgttgacggacgaaaaggcgctggcgcgcgaaatccggcgcttggaa
aagtcgatgatggaccatgcgcgcaacctggaattcgaacaggccgcggcggcgcgagat
gccctgaacgcgctcaaggaacgggtgttgctggatggcgcgcgttaa
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integrated database retrieval system
