Bordetella genomosp. 8: CAL12_17260
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Entry
CAL12_17260 CDS
T09515
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv03420
Nucleotide excision repair
bgv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAL12_17260
03430 Mismatch repair
CAL12_17260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgv03400
]
CAL12_17260
Enzymes [BR:
bgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAL12_17260
DNA repair and recombination proteins [BR:
bgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAL12_17260
MMR (mismatch excision repair)
Other MMR factors
CAL12_17260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARP82393
UniProt:
A0A1W6YP93
LinkDB
All DBs
Position
complement(3791090..3793387)
Genome browser
AA seq
765 aa
AA seq
DB search
MIDKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQNGLASPYALLAVTFTNK
AAREMLARITAILPIDTRGLWVGTFHGLCNRLLRAHHRDAGLPQAFQILDTADQLAAIKR
LLKANGIDDEKYPPRDVQRFINGAKEEGQRPGELEAWDSHRRRLIEIYQLYEAQCQREGV
VDFPELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAHIFAV
GDDDQSIYAFRGANVGNMADFERDYAHGTVIRLEQNYRSYGHILDAANALIDHNSGRLGK
NLWTEQGEGEPVRVIEQPSDGMEAQWVVDEIRALVNDGRARREIAVLYRSNAQSRVLEHA
LFSAAIPYKVYGGLRFFERQEIKHALAYLRLIANPHDDTSWMRVVNFPARGIGARTLEQL
ADAARAHDTSLYGAVARVAGKGGANLAQFAALIGRMADDTRELPLPEMVEHVLEASGLIE
HYRGEKEGTERIENLNELVNAAAVFSTEENFDGLPAGVAAQREPIPGPDAAGATDPAFAA
PAENLTPLAAFLSHAALEAGDNQAQAGQDAVQMMTVHAAKGLEFDAVFITGLEEGLFPHE
NSVLEQAGLEEERRLMYVAITRARERLYLSLAQSRMLHGQTRYAMRSRFLGEIPEQHLKW
LTPRATMGDEYGAANRDWRGADRDAFGRKPTGTIAPRQPRGVASGVTVGDRQYRIGQGVR
HARFGDGTIIGLSGNGQDAQAQIQFRDVGPKTLALGIAKLDVIAG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatcgataagttaaatcccgaacaacgcgccgccgttacgctcgagccgcagcatgcc
ctggtcctggccggggcaggcagcggcaaaacgcgtgtattgaccacgcgcatggcgtgg
ctgatccagaatggcctggccagcccttatgcgctgttggctgtcaccttcaccaacaag
gcggcgcgcgaaatgctggcacggatcaccgcgatcctgcccatcgatacgcgcgggctg
tgggtaggcacctttcacggcctgtgcaatcgcttgctgcgcgcgcatcatcgcgacgcg
ggcctgcctcaggccttccagatcctggacaccgccgaccaactggcggcgatcaagcgc
ctgctcaaggccaacggtatcgacgatgaaaaatacccgccgcgcgacgtgcagcgtttc
atcaacggtgccaaggaagaaggccagcgccccggcgaactcgaagcctgggacagccat
cggcgccgcctgatcgagatctatcagctgtacgaagcgcagtgccagcgcgaaggcgtg
gtcgatttccccgaactgctgttgcgtgcctacgaactgctgtcgcgcaacgcgccagtg
cgtgagcactaccagcgccggtttcgccacatcctggtcgacgaattccaggacaccaac
acactgcagtacaagtggctgcggctgctggccggcggcggcgcgcatatcttcgccgtc
ggcgacgacgaccagtccatctacgctttccgcggcgcgaacgtcggcaacatggccgac
ttcgaacgcgactatgcgcatggcacggtcatccgcctggaacagaactatcgttcctac
ggccatatcctggacgccgccaacgcgctgatcgaccataacagcgggcgactgggcaag
aacctatggacggagcagggcgaaggcgagcccgtgcgcgtcatcgagcagccgtccgac
ggcatggaagcacagtgggtcgtggacgaaatccgcgccctggtcaacgacgggcgggcg
cgccgcgaaatcgccgtgctgtatcgaagcaacgcgcaatcgcgcgtgctggaacatgcg
ctgttttccgctgccatcccctacaaggtctatggcggcctgcgctttttcgagcgccag
gaaatcaagcatgcgttggcctacctgcgcctgatcgccaacccgcatgacgatacgtcg
tggatgcgggtagtgaatttcccggcacgcggcatcggcgctcgcacgctcgaacagttg
gcggatgccgcacgcgcgcacgacacgagcctgtacggcgcggtcgcccgcgtggcgggc
aagggcggcgccaatctggcgcagttcgccgcgctgatcggccgcatggcggacgacacg
cgcgaactgcccttgccggaaatggtcgagcacgtgctggaagccagcgggctcatcgag
cattaccgtggcgaaaaagaaggcacggagcgcatcgagaacctgaacgaactggtcaac
gccgcggcggtgttttcgaccgaggaaaatttcgacggcttgccggcgggcgtggctgct
caacgcgaaccgatcccggggcctgacgccgcgggggcgacggatcccgcgtttgccgcg
ccggcggaaaacctgacgccgttggcggccttcctgtcccacgccgcgctggaggcgggc
gacaaccaggcccaggccggccaggacgccgtccagatgatgaccgtgcacgcggccaag
ggcctggaattcgacgcggttttcattaccgggctcgaagaaggcctgttcccgcacgaa
aacagcgtgctggaacaagccggcctggaagaagaacgccggctgatgtacgtggcgatc
acccgggcgcgcgaacgcctgtacctgagcctggcgcaaagccggatgctgcacggacag
acacgctacgccatgcgttcgcgcttcctgggtgaaatccccgaacagcatctgaaatgg
ctgaccccccgcgccaccatgggcgacgagtatggcgccgccaacagggattggcgcggc
gccgaccgtgatgccttcggccgcaagcccaccggcaccattgcgccacgccagccgcgc
ggggtggcgtcgggcgtgacggttggcgatcgtcagtaccggatcgggcagggtgtgcgg
cacgcgcgtttcggcgacgggaccatcatcggcctaagcggcaatggccaggacgcgcaa
gcccagatccagttccgcgatgtaggtcccaagacgctcgcgctcggcattgccaagctg
gacgtgatcgccggctga
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