KEGG   Bordetella genomosp. 8: CAL12_18090
Entry
CAL12_18090       CDS       T09515                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
bgv  Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:bgv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgv03400]
    CAL12_18090
DNA repair and recombination proteins [BR:bgv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CAL12_18090
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB DnaB_C GvpD_P-loop AAA_22 AAA_16 DUF7125 Rad51 ChlI AAA_24 AAA_14 SLFN-g3_helicase Lon_C AAA_5 nSTAND3 NTPase_1 RecA ABC_tran AAA MCM Mur_ligase_C ATPase_2 Zn_ribbon_tTFIIB AAA_28 Zeta_toxin ZnF_RZ-type DUF7129 MMR_HSR1 PAXNEB DAP3 Zn_ribbon_8 AAA_29
Other DBs
NCBI-ProteinID: ARP82537
UniProt: A0A1W6YN88
LinkDB
Position
complement(3975039..3976409)
AA seq 456 aa
MAKSRTVYVCAECGGTSPKWQGKCPHCGAWNTLSETLEAAAPGAAASHRYAPLAASSPVR
SLAEIEAREVPRQPTGLDEFDRVLGGGLVAGAVVLIGGDPGIGKSTLLLQALASLSETAN
VLYVTGEESAEQVALRARRLGLSTGNVNLLAEIRLEAIQAAVTEQKPSVAVIDSIQTLYS
GELTAAPGSVSQVRECAAQLTRLAKQTGIAIVMIGHVTKDGALAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAFKNRFGAVNELGVFAMTDRGLRGVANPSALFLSQHDRQVAGSCVMVTQ
EGTRPLLVEIQALVDGVQGSNPRRLTVGLESNRLAMLLAVLHRHAGVVTSDQDVFVNAVG
GVRITEPAADLPVLLSIISSLRDRPLPRGLVAFGEVGLAGEIRPAPRGQERLREAAKLGF
SVALIPKANAPRQPIEGLEVWAVDRLEHALDRLKNG
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggccaaatcacgaaccgtctacgtctgcgccgaatgcggcggcaccagcccgaaatgg
cagggcaagtgcccgcattgcggcgcctggaacaccctgtcggaaaccctggaagccgcc
gcccccggggcggccgcgtcgcatcgctatgcgccgttggcggcgtccagcccggtgcgc
agcctggccgagatcgaagcgcgcgaagtaccgcgccagcccaccggactggacgagttc
gaccgggtgctgggcggcggcctggtggccggtgccgtcgtgctgatcgggggggacccc
ggcatcggcaagtccaccttgctgctgcaggccctggcatcgctgtccgaaaccgccaac
gtgctgtatgtcaccggcgaagaatcggccgaacaggtggcgctgcgtgcgcgccgtctg
ggcctgagcaccggcaacgtcaatctgctggcggaaatccgcctggaagccatccaggcc
gccgtcaccgagcagaagccgtccgtggcggtcatcgactcgatacagacgctgtacagc
ggcgaactcaccgccgcgcccggctcggtttcccaagtgcgcgagtgcgccgcccaattg
acgcggctggccaagcagaccggcatcgccatcgtgatgatcggccacgtcaccaaggat
ggcgcgctggcgggcccgcgggtgctggaacacatcgtcgacacggtgctgtatttcgaa
ggggacacgcactcgtccttccgcctggtgcgcgccttcaagaaccgcttcggcgccgtc
aacgaactgggcgtgttcgcgatgaccgatcgcggcctgcgcggcgtggcgaatccgtcg
gcgctgttcctgtcgcagcacgatcgccaggtggcgggctcctgcgtgatggtcacgcag
gaaggaacgcgtccgctgctggtggaaatccaggccctggtcgatggcgtgcagggttcc
aatcccaggcggctgacggtgggcctggaaagcaatcggctggcgatgctgctggcggtg
ctgcatcggcatgccggcgtggtcacctcggaccaggacgtcttcgtcaacgcggtcggc
ggcgtgcgcatcaccgagccggcggcggacctgccggtattgctttccatcatctcgtcg
ctacgcgacaggcccttgccgcgcggcctggtcgccttcggcgaagtcggcctggccggc
gaaatccgtcccgcgccgcgcggccaggaacgcctgcgcgaagccgccaagctgggcttc
agcgttgcgctgattcccaaggccaacgcgccacggcagccgatcgaaggattggaggta
tgggccgtggatcgcctggaacatgcgctggacagattgaagaacgggtaa

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