Bordetella genomosp. 8: CAL12_18090
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Entry
CAL12_18090 CDS
T09515
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgv03400
]
CAL12_18090
DNA repair and recombination proteins [BR:
bgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CAL12_18090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
GvpD_P-loop
AAA_22
AAA_16
DUF7125
Rad51
ChlI
AAA_24
AAA_14
SLFN-g3_helicase
Lon_C
AAA_5
nSTAND3
NTPase_1
RecA
ABC_tran
AAA
MCM
Mur_ligase_C
ATPase_2
Zn_ribbon_tTFIIB
AAA_28
Zeta_toxin
ZnF_RZ-type
DUF7129
MMR_HSR1
PAXNEB
DAP3
Zn_ribbon_8
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ARP82537
UniProt:
A0A1W6YN88
LinkDB
All DBs
Position
complement(3975039..3976409)
Genome browser
AA seq
456 aa
AA seq
DB search
MAKSRTVYVCAECGGTSPKWQGKCPHCGAWNTLSETLEAAAPGAAASHRYAPLAASSPVR
SLAEIEAREVPRQPTGLDEFDRVLGGGLVAGAVVLIGGDPGIGKSTLLLQALASLSETAN
VLYVTGEESAEQVALRARRLGLSTGNVNLLAEIRLEAIQAAVTEQKPSVAVIDSIQTLYS
GELTAAPGSVSQVRECAAQLTRLAKQTGIAIVMIGHVTKDGALAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAFKNRFGAVNELGVFAMTDRGLRGVANPSALFLSQHDRQVAGSCVMVTQ
EGTRPLLVEIQALVDGVQGSNPRRLTVGLESNRLAMLLAVLHRHAGVVTSDQDVFVNAVG
GVRITEPAADLPVLLSIISSLRDRPLPRGLVAFGEVGLAGEIRPAPRGQERLREAAKLGF
SVALIPKANAPRQPIEGLEVWAVDRLEHALDRLKNG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcacgaaccgtctacgtctgcgccgaatgcggcggcaccagcccgaaatgg
cagggcaagtgcccgcattgcggcgcctggaacaccctgtcggaaaccctggaagccgcc
gcccccggggcggccgcgtcgcatcgctatgcgccgttggcggcgtccagcccggtgcgc
agcctggccgagatcgaagcgcgcgaagtaccgcgccagcccaccggactggacgagttc
gaccgggtgctgggcggcggcctggtggccggtgccgtcgtgctgatcgggggggacccc
ggcatcggcaagtccaccttgctgctgcaggccctggcatcgctgtccgaaaccgccaac
gtgctgtatgtcaccggcgaagaatcggccgaacaggtggcgctgcgtgcgcgccgtctg
ggcctgagcaccggcaacgtcaatctgctggcggaaatccgcctggaagccatccaggcc
gccgtcaccgagcagaagccgtccgtggcggtcatcgactcgatacagacgctgtacagc
ggcgaactcaccgccgcgcccggctcggtttcccaagtgcgcgagtgcgccgcccaattg
acgcggctggccaagcagaccggcatcgccatcgtgatgatcggccacgtcaccaaggat
ggcgcgctggcgggcccgcgggtgctggaacacatcgtcgacacggtgctgtatttcgaa
ggggacacgcactcgtccttccgcctggtgcgcgccttcaagaaccgcttcggcgccgtc
aacgaactgggcgtgttcgcgatgaccgatcgcggcctgcgcggcgtggcgaatccgtcg
gcgctgttcctgtcgcagcacgatcgccaggtggcgggctcctgcgtgatggtcacgcag
gaaggaacgcgtccgctgctggtggaaatccaggccctggtcgatggcgtgcagggttcc
aatcccaggcggctgacggtgggcctggaaagcaatcggctggcgatgctgctggcggtg
ctgcatcggcatgccggcgtggtcacctcggaccaggacgtcttcgtcaacgcggtcggc
ggcgtgcgcatcaccgagccggcggcggacctgccggtattgctttccatcatctcgtcg
ctacgcgacaggcccttgccgcgcggcctggtcgccttcggcgaagtcggcctggccggc
gaaatccgtcccgcgccgcgcggccaggaacgcctgcgcgaagccgccaagctgggcttc
agcgttgcgctgattcccaaggccaacgcgccacggcagccgatcgaaggattggaggta
tgggccgtggatcgcctggaacatgcgctggacagattgaagaacgggtaa
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