Bordetella genomosp. 8: CAL12_18350
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Entry
CAL12_18350 CDS
T09515
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv03030
DNA replication
bgv03410
Base excision repair
bgv03420
Nucleotide excision repair
bgv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAL12_18350
03410 Base excision repair
CAL12_18350
03420 Nucleotide excision repair
CAL12_18350
03440 Homologous recombination
CAL12_18350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgv03032
]
CAL12_18350
03400 DNA repair and recombination proteins [BR:
bgv03400
]
CAL12_18350
Enzymes [BR:
bgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAL12_18350
DNA replication proteins [BR:
bgv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CAL12_18350
DNA repair and recombination proteins [BR:
bgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CAL12_18350
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAL12_18350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WD40_4
Motif
Other DBs
NCBI-ProteinID:
ARP82584
UniProt:
A0A1W6YNK7
LinkDB
All DBs
Position
complement(4029247..4031964)
Genome browser
AA seq
905 aa
AA seq
DB search
MNKTLLLVDGSSYLYRAYHAMPDLRNAQGEPTGALYGVVNMLRKLKQDYDAQYAACIFDA
RGKTFRDDLYPDYKSHRPPMPEDLAVQIEPIHNVVRALGWPVFAIEGVEADDVIGTLARI
ATEHGIDTIVSTGDKDLAQLVDDHVTLVNTMTGETLDPAGVVKKFGVPPERIVDYLMLIG
DAVDNVPGVDKVGPKTAVKWLTEYGSVDKLLEAADAIKGVAGNNLRLAATNFPLTRKLLS
VRRDCDLSGTMSGPEALIAQEEDKEALLELYERYGFRTWLREVSGETERVPTGDSRVAPE
RPAAPEQVDYQIITDWAAFDAWMEKLRGAPLAAFDTETTSLDEMQARLVGMSFSIEPGVA
CYIPVAHRGPEAGDQLPKDEVLARLRAWLEDPAVPKLLHNAKYDAHVLRNEGIRLAGIAE
DTMLQAYVLESHRSVSLAELAQRWLGRSGITYEQLCGKGASQICFDEVPVERAGHYAAED
ADFTIQMHHLLRPRVSADAGLEHIYKLELQVSEVLTEIERTGVRVDADELMRQSTALGQE
MLTLEQRAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEEVLSKLAQDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYAQAAVITGRLASSEPNLQNIPVR
TPAGRRVREAFIAERGVLMSADYSQIELRIMAHVSDDENLQRAFAAGEDIHRATASEVFG
VPLESVAGEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAQYME
STRVLAREQGYVETVFGRRLWLPEIRGGSGPRRQAAERAAINAPMQGTAADLIKKAMVAV
QEWIAREGLLSRMIMQVHDELVLEVPDQEVDQVRAELPGLMCNVAQLRVPLVAEVGVGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccctgttgctggttgacggttctagctatttgtaccgcgcctatcatgcc
atgcctgacttgcgtaacgcgcagggggagccgacgggggcgttgtacggcgtcgtcaat
atgcttcgtaaactgaagcaggattacgacgcgcaatatgcggcttgcattttcgatgcc
cgtggcaagaccttccgtgacgacctgtatcccgattacaagtcgcaccgtccgcccatg
cccgaggacctcgcggtccagatagagcccatacacaatgtggtgcgtgcgctgggatgg
ccggttttcgccatcgaaggcgtggaagccgacgacgtcatcggcacgctggcgcgcatc
gccaccgaacacggtatcgacacgatcgtgtcgacgggcgacaaggacctggcccaattg
gtggatgaccacgtcacgctggtcaacaccatgacgggtgagaccctggatcccgccggc
gtggtcaagaagttcggcgtgccgcccgaacgcatcgtcgattacctgatgctgatcggc
gacgcggtggacaatgtgccgggcgtggacaaggtcggaccgaagacggccgtcaaatgg
ctgaccgaatacggttcggtcgacaagctgctggaagcagcggatgccatcaagggcgtc
gcgggcaacaacctgcgcctggccgcgacgaatttcccgctgacgcgcaagctgctgtcc
gtgcggcgcgattgcgatctgagcggcaccatgtccggaccggaagcgctgatcgcgcag
gaagaagacaaggaagcgctgctggagctctacgagcgctatggtttccggacctggctg
cgcgaggtcagcggcgaaacagaacgcgtcccgaccggcgattcgcgcgtcgcgcccgaa
cgtcccgccgcgcccgaacaggtggattaccagatcatcaccgactgggccgccttcgat
gcatggatggaaaagctgcgcggggcgccgctggccgccttcgatacggagaccacgtcg
ctggacgaaatgcaggcgcgcctggtgggaatgtcgttctcgatcgagcctggcgtggcc
tgctatatcccggtcgcgcatcgcgggcccgaagccggcgaccagttgcccaaggacgag
gtgctggcgcggctgcgcgcgtggctggaagacccggccgtgcccaagttgctgcacaac
gccaagtacgacgcccacgtgctgcgcaacgaaggcatacggctggcggggatcgccgaa
gacacgatgctgcaggcgtatgtgctggagtcccatcgaagcgtcagcctggcggagctg
gcgcagcgatggctgggccgcagcggcatcacctacgaacaattgtgcggcaagggcgcc
agccagatctgcttcgacgaagtcccggtcgagcgggccggccactatgccgccgaagac
gccgacttcacgatccagatgcatcatctgctgcgtccgcgcgtcagcgccgatgccggc
ctggaacacatctacaagctggaactgcaggtttccgaagtcctgaccgaaatcgagcgc
acgggcgtgcgcgtcgacgccgacgagctgatgcggcaaagcacggcgctggggcaggaa
atgctgaccttggagcaacgcgcctacgagcttgccggccagcccttcaacctgaattct
cccaagcagctgggcgagatcctgttcggccgcatgcagctgcccgtggtccgcaagacg
gccagcggcgcgccgtccacggacgaggaagtcctgagcaagctggcccaggactatccg
ctgccccaggtcctgctggaataccggggcctgtccaagctgaagtccacgtataccgac
aagctgccgcgcatgatcaaccccgccaccggccgggtgcacacccattacgcgcaggcc
gccgtcatcaccgggcggctggcctcttccgagccgaacctgcagaacatcccggtacgc
acgccggcgggccgccgcgtgcgggaagccttcatcgccgaacgcggcgtgttgatgtcg
gccgactactcgcagatcgagctgcgcatcatggcgcatgtatcggacgacgagaacctt
cagcgggcgttcgccgcgggcgaggacatccaccgcgccacggcgtccgaggtgttcggc
gttccgttggagtccgtcgcgggagagcagcggcgtgccgccaaggccatcaatttcggc
ctgatctatggcatgggcgtgttcggcctggcgtccaacctgggcatcacccgagatgcc
gcgcaggcgtatatcgatcgctatttcgcgcgctatccgggcgtggcgcagtatatggaa
tcgacgcgcgtgctggcgcgcgagcagggctacgtggaaacggtcttcggccggcggctg
tggctgccggaaatccgcggcggctcgggaccgcgccggcaggccgccgaacgcgccgcc
atcaatgcgcccatgcagggcaccgcggcggacctgatcaagaaggccatggtggcggtc
caggagtggatcgcgcgcgaaggcctgctgtcgcgcatgatcatgcaggtgcatgacgaa
ctggtgctggaagtccccgaccaggaagtcgaccaggtgcgcgccgaactgcccggcctg
atgtgcaacgtggcgcagctgcgcgtgccgctggtggccgaagtgggcgtcggcaagaac
tgggaacaggcgcactag
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