KEGG   Bordetella genomosp. 8: CAL12_18350
Entry
CAL12_18350       CDS       T09515                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bgv  Bordetella genomosp. 8
Pathway
bgv03030  DNA replication
bgv03410  Base excision repair
bgv03420  Nucleotide excision repair
bgv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bgv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CAL12_18350
   03410 Base excision repair
    CAL12_18350
   03420 Nucleotide excision repair
    CAL12_18350
   03440 Homologous recombination
    CAL12_18350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bgv03032]
    CAL12_18350
   03400 DNA repair and recombination proteins [BR:bgv03400]
    CAL12_18350
Enzymes [BR:bgv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CAL12_18350
DNA replication proteins [BR:bgv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CAL12_18350
DNA repair and recombination proteins [BR:bgv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CAL12_18350
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CAL12_18350
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 WD40_4
Other DBs
NCBI-ProteinID: ARP82584
UniProt: A0A1W6YNK7
LinkDB
Position
complement(4029247..4031964)
AA seq 905 aa
MNKTLLLVDGSSYLYRAYHAMPDLRNAQGEPTGALYGVVNMLRKLKQDYDAQYAACIFDA
RGKTFRDDLYPDYKSHRPPMPEDLAVQIEPIHNVVRALGWPVFAIEGVEADDVIGTLARI
ATEHGIDTIVSTGDKDLAQLVDDHVTLVNTMTGETLDPAGVVKKFGVPPERIVDYLMLIG
DAVDNVPGVDKVGPKTAVKWLTEYGSVDKLLEAADAIKGVAGNNLRLAATNFPLTRKLLS
VRRDCDLSGTMSGPEALIAQEEDKEALLELYERYGFRTWLREVSGETERVPTGDSRVAPE
RPAAPEQVDYQIITDWAAFDAWMEKLRGAPLAAFDTETTSLDEMQARLVGMSFSIEPGVA
CYIPVAHRGPEAGDQLPKDEVLARLRAWLEDPAVPKLLHNAKYDAHVLRNEGIRLAGIAE
DTMLQAYVLESHRSVSLAELAQRWLGRSGITYEQLCGKGASQICFDEVPVERAGHYAAED
ADFTIQMHHLLRPRVSADAGLEHIYKLELQVSEVLTEIERTGVRVDADELMRQSTALGQE
MLTLEQRAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEEVLSKLAQDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYAQAAVITGRLASSEPNLQNIPVR
TPAGRRVREAFIAERGVLMSADYSQIELRIMAHVSDDENLQRAFAAGEDIHRATASEVFG
VPLESVAGEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAQYME
STRVLAREQGYVETVFGRRLWLPEIRGGSGPRRQAAERAAINAPMQGTAADLIKKAMVAV
QEWIAREGLLSRMIMQVHDELVLEVPDQEVDQVRAELPGLMCNVAQLRVPLVAEVGVGKN
WEQAH
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaataaaaccctgttgctggttgacggttctagctatttgtaccgcgcctatcatgcc
atgcctgacttgcgtaacgcgcagggggagccgacgggggcgttgtacggcgtcgtcaat
atgcttcgtaaactgaagcaggattacgacgcgcaatatgcggcttgcattttcgatgcc
cgtggcaagaccttccgtgacgacctgtatcccgattacaagtcgcaccgtccgcccatg
cccgaggacctcgcggtccagatagagcccatacacaatgtggtgcgtgcgctgggatgg
ccggttttcgccatcgaaggcgtggaagccgacgacgtcatcggcacgctggcgcgcatc
gccaccgaacacggtatcgacacgatcgtgtcgacgggcgacaaggacctggcccaattg
gtggatgaccacgtcacgctggtcaacaccatgacgggtgagaccctggatcccgccggc
gtggtcaagaagttcggcgtgccgcccgaacgcatcgtcgattacctgatgctgatcggc
gacgcggtggacaatgtgccgggcgtggacaaggtcggaccgaagacggccgtcaaatgg
ctgaccgaatacggttcggtcgacaagctgctggaagcagcggatgccatcaagggcgtc
gcgggcaacaacctgcgcctggccgcgacgaatttcccgctgacgcgcaagctgctgtcc
gtgcggcgcgattgcgatctgagcggcaccatgtccggaccggaagcgctgatcgcgcag
gaagaagacaaggaagcgctgctggagctctacgagcgctatggtttccggacctggctg
cgcgaggtcagcggcgaaacagaacgcgtcccgaccggcgattcgcgcgtcgcgcccgaa
cgtcccgccgcgcccgaacaggtggattaccagatcatcaccgactgggccgccttcgat
gcatggatggaaaagctgcgcggggcgccgctggccgccttcgatacggagaccacgtcg
ctggacgaaatgcaggcgcgcctggtgggaatgtcgttctcgatcgagcctggcgtggcc
tgctatatcccggtcgcgcatcgcgggcccgaagccggcgaccagttgcccaaggacgag
gtgctggcgcggctgcgcgcgtggctggaagacccggccgtgcccaagttgctgcacaac
gccaagtacgacgcccacgtgctgcgcaacgaaggcatacggctggcggggatcgccgaa
gacacgatgctgcaggcgtatgtgctggagtcccatcgaagcgtcagcctggcggagctg
gcgcagcgatggctgggccgcagcggcatcacctacgaacaattgtgcggcaagggcgcc
agccagatctgcttcgacgaagtcccggtcgagcgggccggccactatgccgccgaagac
gccgacttcacgatccagatgcatcatctgctgcgtccgcgcgtcagcgccgatgccggc
ctggaacacatctacaagctggaactgcaggtttccgaagtcctgaccgaaatcgagcgc
acgggcgtgcgcgtcgacgccgacgagctgatgcggcaaagcacggcgctggggcaggaa
atgctgaccttggagcaacgcgcctacgagcttgccggccagcccttcaacctgaattct
cccaagcagctgggcgagatcctgttcggccgcatgcagctgcccgtggtccgcaagacg
gccagcggcgcgccgtccacggacgaggaagtcctgagcaagctggcccaggactatccg
ctgccccaggtcctgctggaataccggggcctgtccaagctgaagtccacgtataccgac
aagctgccgcgcatgatcaaccccgccaccggccgggtgcacacccattacgcgcaggcc
gccgtcatcaccgggcggctggcctcttccgagccgaacctgcagaacatcccggtacgc
acgccggcgggccgccgcgtgcgggaagccttcatcgccgaacgcggcgtgttgatgtcg
gccgactactcgcagatcgagctgcgcatcatggcgcatgtatcggacgacgagaacctt
cagcgggcgttcgccgcgggcgaggacatccaccgcgccacggcgtccgaggtgttcggc
gttccgttggagtccgtcgcgggagagcagcggcgtgccgccaaggccatcaatttcggc
ctgatctatggcatgggcgtgttcggcctggcgtccaacctgggcatcacccgagatgcc
gcgcaggcgtatatcgatcgctatttcgcgcgctatccgggcgtggcgcagtatatggaa
tcgacgcgcgtgctggcgcgcgagcagggctacgtggaaacggtcttcggccggcggctg
tggctgccggaaatccgcggcggctcgggaccgcgccggcaggccgccgaacgcgccgcc
atcaatgcgcccatgcagggcaccgcggcggacctgatcaagaaggccatggtggcggtc
caggagtggatcgcgcgcgaaggcctgctgtcgcgcatgatcatgcaggtgcatgacgaa
ctggtgctggaagtccccgaccaggaagtcgaccaggtgcgcgccgaactgcccggcctg
atgtgcaacgtggcgcagctgcgcgtgccgctggtggccgaagtgggcgtcggcaagaac
tgggaacaggcgcactag

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