Bordetella genomosp. 8: CAL12_18415
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Entry
CAL12_18415 CDS
T09515
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgv03016
]
CAL12_18415
Enzymes [BR:
bgv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CAL12_18415
Transfer RNA biogenesis [BR:
bgv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAL12_18415
Prokaryotic type
CAL12_18415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ARP82596
UniProt:
A0A1W6YNA0
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All DBs
Position
complement(4042777..4043514)
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AA seq
245 aa
AA seq
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MAKRRGLMLDGVLLLDKPEGLSSNHALQRARRTLDAAKAGHTGTLDPFATGLLVCCMGKG
TKLCGVMLGADKGYRATLRFGEETDSGDLTGNVVARAPEGFTGVDETALRDVLSRFLGTI
TQIPPMYSALKRDGKPLYEYARAGVEVEREARQVTLHRVDLLSCDGMTAEIDVLCSKGTY
IRTLAQDIGRALGCHAHLVALRRTQVGPFALDGAVTLDALQAMADPKRALLPLNELPAGL
APASP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgacgcgggctgatgctcgacggtgtcctgctgctggataagcccgaaggc
ttgtcgagcaatcatgccttgcagcgcgcgcgccgcacgctggacgccgccaaggccggc
cataccggtacgctggatccgttcgccacgggcctgctggtgtgctgcatgggcaagggc
accaagctgtgcggcgtgatgctgggcgcggacaagggctatcgggccacgctgcgcttc
ggagaggaaaccgactccggcgacctgacgggtaacgtcgtggcgcgggccccggaaggt
ttcacgggggtggacgagaccgccttgcgcgatgtgctgtcacgtttcctgggcaccatc
acgcagattccgcccatgtattccgccctgaaacgcgacggcaagcctttgtacgagtac
gcgcgcgccggcgtggaagtggaacgcgaggcccgacaggtgaccttgcatcgcgtcgac
ttgctgagctgcgacggcatgacggcggaaatagatgtgttgtgcagcaagggcacctat
atacgtaccctggcccaggacatcggccgggcgctgggctgccatgcgcatctggtggcc
ctgcgccgtacccaggtgggtccgttcgcgctggatggcgcggtcacgctggatgcgctg
caggccatggccgaccccaagcgggccttgctgcccctgaatgaattgccggcgggcctg
gcgcccgcctcaccttaa
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