Bordetella genomosp. 8: CAL12_18440
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Entry
CAL12_18440 CDS
T09515
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgv03009
]
CAL12_18440
Enzymes [BR:
bgv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CAL12_18440
Ribosome biogenesis [BR:
bgv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CAL12_18440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ARP84617
UniProt:
A0A1W6YU60
LinkDB
All DBs
Position
complement(4049452..4051185)
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AA seq
577 aa
AA seq
DB search
MSVAPDGDASVPGNRGKGRKLRTPFRRRRGDAVSGAESTAEAGASTQPHGSAADTEAVSP
GNEREAEQALAYLEKTARMEQRLNKYLNSEAVMPKLHKVLADAGVGSRREMEELIVAGRV
SVNGEPAHIGQRVAAGDQVRVNGKLITRVNTRKPPRVILYHKPAGEIVSHDDPGGRASVF
ARLPKLRTGKWLSVGRLDLNTEGLLIFTTSGDMANRIMHPRYGAEREYAVRVLGEMDAAQ
RASLVEGIDLDDGKAAFGSLDYLGGEGSNRWYRVTLNEGRNREVRRMFEAIGVTVSRLIR
TRFGDVVLPRNLRRGRWEELDPNLVTALMVQLGLLRDDDESGRRPKQPQSHDSALPPGFG
TLQNNGMNGARIGRRGKLQGGGRAAKNPLGGMSYPSDPFGTGLLVTGGYANGHPMGNDGA
PRGGKQRRGPGKRPGQGQGQGPGQAAGHAPGGQHQARGKSGRKGKPGGGNGAAANAAGAN
PGNHAGQGQAGQGHPGAPGKGPQRGRPGKNAAPGKNAAPGKKRGNGNAKGPRPGGGGGSG
SGGGGGGGRGDDWQPRGAAAHESRLGVIGGRGGRGSR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgcgccggatggcgacgcatccgtgccgggcaaccgcggcaagggtcgcaag
ctgcgcacgcctttccgtcgccgtcgtggcgacgccgtgtcgggcgcggaatcaacggcg
gaggccggcgcgtcaacgcagccccatggctccgccgcagataccgaagccgtgtctccg
ggtaacgaacgggaagccgaacaggccctggcctacctcgaaaagactgcccgcatggag
cagcgcctgaacaagtacctgaacagcgaagccgtgatgcccaagctgcacaaggtgctg
gccgacgccggcgtgggctcgcggcgcgaaatggaagagctgatcgtcgccggacgcgtg
tccgtgaacggcgagcctgcccatatcgggcagcgcgtcgccgccggcgaccaggtgcgc
gtcaacggcaagctgatcacgcgcgtcaatacccgcaagccgccgcgcgtgatcctgtat
cacaagcccgctggcgaaatcgtcagccatgacgatccgggcggacgcgccagcgtgttt
gcgcgcctgcccaagctgcgcaccggcaaatggctgtcggtgggtcgcctggacctgaat
acggaaggcctgctgattttcaccacgtcgggcgatatggcgaatcgcatcatgcacccc
cgttatggcgcggaacgcgaatacgccgtccgtgtcctgggtgaaatggacgccgcgcag
cgcgcgtccctggtcgaaggcatagacctggatgacggcaaggccgcattcggatcgctg
gactacctgggcggcgagggcagcaaccgctggtatcgcgtcacgctgaacgaaggccgc
aaccgtgaagtgcgccgcatgttcgaggcgataggcgtgacggtcagccggctcatccgg
acgcgtttcggcgatgtcgtcctgccgcgcaacctgcggcgcggccgctgggaagaactc
gatcccaatctggtcaccgcgctcatggtgcagctcggcctcctgcgcgacgacgacgaa
agcggccggcgccccaagcagccgcaatcgcacgacagcgcgttgccgcccggcttcggc
accttgcagaacaatggcatgaacggcgcccgcatcggccgccgcggcaagcttcagggc
ggaggccgcgcggccaagaatccgctgggcggcatgtcctacccatccgatcccttcggc
accggactgctggtgaccggcggctatgccaatggacatcccatgggcaatgatggcgcg
ccacgcggcggcaagcaacggcgcgggccgggcaagcgtccgggacaagggcagggccag
gggccggggcaggccgcgggccatgctcccggcgggcaacatcaggcgcgcgggaagtcc
gggcgcaagggcaagccaggcggcggcaacggcgcggcggcgaatgccgcgggagcgaat
cctggcaaccacgcaggacaagggcaggccgggcagggccatcctggcgcgccaggcaag
gggccgcagcgcggccgcccgggcaagaatgccgcacccggaaagaatgccgctcccggc
aagaagcggggcaatggcaacgccaaggggccgcgtcccggcggtggcggcggtagcggt
agcggcggcggcggcggcggcggccgcggcgacgactggcagccgcgtggcgcggcggcc
cacgagtcgcgcctgggcgtcatcggtggaaggggcggtcgcggatcaaggtag
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