Bordetella genomosp. 8: CAL12_21860
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Entry
CAL12_21860 CDS
T09515
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgv03000
]
CAL12_21860
Transcription factors [BR:
bgv03000
]
Prokaryotic type
Helix-turn-helix
Other families
CAL12_21860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS
PAS_4
PAS_8
AAA_5
HTH_30
AAA_16
HTH_28
HTH_23
PAS_9
HTH_Tnp_ISL3
AAA_19
HTH_psq
BtrH_N
HTH_7
HTH_1
Diguanyl_cycl_sensor
AAA_2
HTH_3
TIP49
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
ARP83200
UniProt:
A0A1W6YQ26
LinkDB
All DBs
Position
complement(4825915..4827918)
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AA seq
667 aa
AA seq
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MAVFPAPADFIGDRTPPGARGPSALPSLYAVTGYGLFESLRQLAPEFAARARVELLHDAF
DAALAPLNHAIAQGRCDVVVASGSNGAFLRAKLAVPVVLVQIGGYDLMAALAQARELSPR
VAVVLHHEVTAALRRFMRVFGLDVELRAYDTPDDAARCIRELAAQGVEVVVGAGMVTDFG
RKAGLTAVLLYSADSVRAAMETALAIAQAQYEERARRDRLDLVLRHLNDGVVAVDMHGHV
TTMNPAAARILGTAASQAAGRPLAETAAGLTAGPALTRGTPELGRVEDVRGQPLVVDAVP
LFEAGTQTGAVLTLHSSQPLEHAVGRLRAHSHRRSRSARYTLNGMVAVSAAMRELVHRCE
VLARSSDASVLIQGESGSGKEVVAQGIHRASRRHARPFVAINCGAFPEQLLESELFGYEE
GAFTGARRQGKAGLFEAADGGTLLLDEVGEMPLPLQTRLLRALQEKEITRVGGIDAIPVD
VRIIAATHRDLAAMARQGSFRHDLFYRLHILQIRVPPLRERPEDIAALAAELLPAALERI
GAREVARDVLRVALPLLLAHDWPGNVRELENVVERMALECLLADAVPSVGTLRGVLDPPG
PDSAAAPGASGGPGRPGVRRLDAVQRASEHLHIREVLAAHGGNQAAAARELGISRTTLWR
KLRGAGG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctttcccgcaccggccgatttcatcggcgaccgcacgccacccggggcgcgc
gggccgtccgcgttgcccagcctgtatgccgtcaccggctacggcctgttcgaaagcctg
cggcaactggcgcccgaattcgccgcccgggccagggtggagctactgcatgatgcgttc
gatgccgcgctggcgccgttgaaccacgcgattgcgcagggtcgctgcgacgtggtggtg
gcctcgggcagcaatggcgctttcctgcgcgcgaagctggcagtgccggtggtgctggtc
cagatcggcggttatgacctgatggccgcgttggcgcaggcccgcgaactgtcgccacgc
gtggcggtggtgctgcatcatgaagtcactgcagcgctgcggcgcttcatgcgcgtcttc
ggcctggacgtggagctgcgggcctacgatacgcccgacgatgccgcgcgttgcatccgc
gagctggccgcgcagggcgtggaggtcgtcgtgggggccgggatggtcaccgattttggc
cgcaaggccggcttgacggcggtgctgctgtattccgccgactcggtgcgcgccgccatg
gaaacggcgttggccatcgcccaggcgcaatacgaagagcgggcgcggcgcgaccggctg
gacctggtgctgcggcatttgaacgacggcgtggtggcggtcgacatgcacgggcacgtc
acgacgatgaatcctgccgcggcgcgcatcctgggcaccgccgcatcccaggcggcgggc
cgtccgctggccgagacggccgccggtctgaccgccggccccgcgctgacgcgcggaacg
cccgaactgggccgcgtggaggacgtgcgcggccagccgctggtggtggatgccgtgccg
ctgttcgaggccggcacgcagacgggcgccgtgctgaccctgcattcctcgcagccgctg
gagcatgcggtgggccgcttgcgcgcgcacagccaccggcgttcgcgttcggcccgctac
accttgaatggcatggtcgcggtgtcggcggccatgcgcgagctggtccatcgctgcgag
gtgctggcgcgtagcagcgatgcgtcggtgctgatccagggggaaagcggctcgggcaag
gaagtggtggcgcagggcattcaccgcgcgagccgccgccacgcgcgtcccttcgtggcg
atcaactgcggcgcctttcccgaacaactgctcgaaagcgagctgttcggctacgaggag
ggcgcattcaccggcgcgcggcgccagggcaaggcgggcctgttcgaagccgcggacggc
ggcacgctattgctggacgaagtgggggagatgcccttgcccttgcagacacgtttgctg
cgcgccctgcaggaaaaggagatcacgcgggtgggcggcatcgacgcgatacctgtcgac
gtgcgcatcatcgccgcgacccatcgggacctggcggccatggcgcggcagggatcgttc
cggcacgatctgttctaccggctgcacatcctgcagatccgggtaccgccgctgcgcgag
cgtccggaggatatcgccgcgctggcggccgagctcctgcccgcggccctggaacgcatc
ggcgcgcgcgaagtggcgcgcgacgtgttgcgggtcgccttgccgctgctgttggcgcat
gactggccgggcaatgtccgcgaactcgagaacgtcgtcgagcgcatggcgctggagtgc
ctgctggccgatgccgtgccgtcggtcggcacgctcaggggcgtgctcgatccgccgggg
ccggactcggccgccgcgcctggcgcatcgggcggccccggccggcctggcgtccgccgg
ctggatgccgtgcagcgggccagcgaacacctgcacatccgggaagtgctggcggcgcac
ggcggcaatcaggccgccgccgcgcgcgaattggggatcagccgcacgacgctgtggcgc
aagctgcgcggtgctggcggctga
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