Bordetella genomosp. 8: CAL12_21915
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Entry
CAL12_21915 CDS
T09515
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv00040
Pentose and glucuronate interconversions
bgv01100
Metabolic pathways
bgv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CAL12_21915
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAL12_21915
Enzymes [BR:
bgv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CAL12_21915
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ARP83211
UniProt:
A0A1W6YQC7
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Position
complement(4837929..4839140)
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AA seq
403 aa
AA seq
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MKENRMMRWLLAFVAVFVVSYGGIAAAEDTCRIPDEHCPAVASLLQQRQGYGRNATGGLG
GKFVEVTSDKDAGPGTLRAALQHAKGATWIRFASDMTIVLASQLRVPANVTIDGRGRQVT
LIDDGLGVYGSRNVILTHLTIDGRFSRLTQAVNVANGSQDVWVDHMDLSRMSDRLLNVKN
GSTDVTVSWTKFHDSDKVMLLNNITSKDLYRNYERDKIARVTLHHNYFFNTVQRNPRAQF
GTFHLFNNLVENWDFYGMSFSLEARALVEGNMFSNVAQRKCMEPEFFPTVEGVKVNYCKY
IPTAPQRSALPNGGSDRRNFEKSKAAFGYERDFKAFLRVKDNLYLGDAKPVLEDYRPEDV
PAPPYCYAYEPPTADVAQKIRRFAGNTHEVPPAVEARSGSGCR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaacaggatgatgcgctggctgcttgctttcgttgccgttttcgttgtgtcg
tatggcggcatcgccgctgcggaggacacctgccgtattcccgatgagcactgccccgcg
gtagcgtcgctattgcagcagcggcaaggctatggacgcaatgccacgggtggcctgggc
gggaaattcgtcgaggtgacgtcggacaaggatgcgggccccggaaccctgcgcgcggcc
ttgcagcacgccaagggcgccacgtggatacgcttcgcctcggacatgaccatcgtgctg
gcgtcgcagctgcgcgtgcccgccaacgtgacgatcgacgggcgtggccggcaggtcacc
ttgatcgatgacggattgggcgtctatggcagccggaacgtgatcctgacgcacctgacg
atagacggccgtttcagccggctgacgcaggcggtgaatgtggccaatggcagccaggac
gtgtgggtggaccacatggatctgtcgcgcatgtcggaccggctgttgaacgtgaagaac
ggttcgaccgacgtcacggtgtcatggacgaagtttcacgactcggacaaggtcatgttg
ctcaataacattacctcgaaggatctgtaccggaactacgagcgtgacaagatcgcgcgg
gtgacgctgcaccacaattacttcttcaacaccgtgcagcgcaatccccgggcgcaattc
ggcacgttccacctgttcaacaacctggtggaaaactgggatttctacgggatgagcttc
agcctggaagcccgcgcgctggtcgagggaaatatgttcagcaacgtggcgcagcgcaag
tgcatggagccggaattcttccccacggtcgaaggcgtcaaggtgaactactgcaagtac
atcccgaccgcgccgcagagaagcgccctgcccaacgggggatccgatcgccgcaatttc
gagaagtcgaaggccgccttcggttatgagcgggatttcaaggccttcctgcgcgtgaag
gacaatctgtacctgggcgacgccaagccggtgctggaggactaccgtcccgaggatgtg
cccgcgccgccgtattgctatgcctacgagccgccgacggcggatgtggcgcagaagata
cgccggttcgctggcaatacgcatgaagtcccgccggccgtcgaagcccgcagcgggtcg
ggctgccgctga
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