Bordetella genomosp. 8: CAL12_25320
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Entry
CAL12_25320 CDS
T09515
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv00970
Aminoacyl-tRNA biosynthesis
bgv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CAL12_25320 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
bgv03029
]
CAL12_25320 (gatB)
Enzymes [BR:
bgv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
CAL12_25320 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
CAL12_25320 (gatB)
Mitochondrial biogenesis [BR:
bgv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CAL12_25320 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
Motif
Other DBs
NCBI-ProteinID:
ARP83802
UniProt:
A0A1W6YRT8
LinkDB
All DBs
Position
5603844..5605298
Genome browser
AA seq
484 aa
AA seq
DB search
MNWEIVIGLETHTQLSTESKIFSGSSTRFGAAPNTQANLVDLALPGSLPVMNRAAAERAI
RFGLAVGGRIAPRSIFARKNYFYPDLPKGYQISQYEIPVVSGGSISFFVGETAKTVQLTR
AHLEEDAGKSLHDEFHLANGAPASGIDLNRAGTPLLEIVSEPEMRSAAEAVAYARALHSL
VVWLGICDGNMQEGSFRCDANVSVRPVGQKEFGTRAEIKNVNSFRFLERAIIYEARRQIE
LIEDGGTVVQETRLYDADRDETRSMRSKEDAHDYRYFPDPDLPPLVIASSWVEEVRATMP
ELPADKRARFETKYGLSAYDAAQLTTSRDMADYFEAVARALPDGQAKQAANWVMGELAAA
LNRSEIEVAASPVAAPALAALIARILDGTISNKIAREVFAGMWAGEQGGQADAIIEARGL
KQISDTGAIGAMIDEVLAANPAVVEEYRAGKQKAFNSLVGQIMKAAKGKANPQQVNDLLK
QKLG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggaaatcgtcatcgggctggaaacgcatacgcagctttccaccgaatcgaaa
atcttctccggcagcagcacgcgcttcggcgcggcgccgaacacgcaggcgaacctggtc
gacctggccctgccgggcagcctgccggtgatgaaccgcgcggcggcggagcgggcgatc
cgcttcgggctcgccgtcggcgggcgcatcgcgccgcgctcgatcttcgcccgcaagaat
tatttctatcccgacctgcccaagggttaccagatcagccagtacgagatcccggtggtc
agcggcggctcgatctcgttcttcgtcggtgaaacggccaagaccgtgcagttgacgcgc
gcgcacctggaagaggacgccggcaagtcgctgcacgacgagttccacctggccaacggc
gcgccggccagcggcatcgacctgaaccgcgccggcacgcccctgctggaaatcgtcagc
gaaccggaaatgcgttcggccgccgaagccgtggcctatgcccgcgcgctgcacagcctg
gtggtctggctggggatatgcgacggcaatatgcaggaaggctcgttccgctgcgacgcc
aacgtgtcggtgcgcccggtcgggcagaaggaattcggcacccgcgcggagatcaagaac
gtcaactccttccgcttcctggaacgcgccatcatctacgaagcgcgccggcagatcgaa
ttgatcgaagacggcggcacggtggtgcaggaaacccgcctgtacgacgcggaccgcgac
gaaacccgcagcatgcgcagcaaggaagacgcgcacgactaccgctacttccccgatccg
gacctgccgccgctggtgatcgcatcgtcgtgggtggaagaggtacgcgccaccatgccg
gaattgccggccgacaaacgcgcccgcttcgaaacgaaatatgggctgtcggcctacgat
gcggcgcaattgaccaccagccgcgacatggccgactacttcgaagcggtcgcgcgcgcg
ctgcctgacggccaggccaagcaggcggccaactgggtgatgggcgaactggccgcggcg
ctgaaccgctcggaaatcgaagtcgccgcgtcgcccgtcgccgcgcctgcgctggcggcg
ctgatcgctcgcatcctggacggcacgatctccaacaagatcgcccgtgaagtgtttgcc
gggatgtgggcgggcgaacagggcggccaggccgacgccatcatcgaggcgcgcggactc
aagcagatcagcgatacgggcgcgatcggcgccatgatcgacgaggtcctggcggccaac
cccgccgtggtcgaagagtaccgggcgggcaagcagaaggccttcaattccctggtgggg
cagatcatgaaagccgccaagggcaaggccaacccgcagcaggtcaacgacctgctgaag
cagaagctgggatag
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