Bordetella genomosp. 8: CAL12_26345
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Entry
CAL12_26345 CDS
T09515
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bgv
Bordetella genomosp. 8
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgv03009
]
CAL12_26345
Enzymes [BR:
bgv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CAL12_26345
Ribosome biogenesis [BR:
bgv03009
]
Prokaryotic type
ribosomal protein modification factors
CAL12_26345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
ARP84756
UniProt:
A0A1W6YUJ2
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All DBs
Position
5822132..5823493
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AA seq
453 aa
AA seq
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MATAKAVTADSGSSRAPRVGFVSLGCPKALVDSERILTQLRTEGYDVTPSYDDADVVVVN
TCGFIDSAKAESLEAIGEALAENGKVIVTGCMGIEESAIRDVHPSVLAVTGPQQYEQVVR
AVHQAAPPSATHNPYLDLVPPQGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRP
VGDVLNEAERLVKAGVKELLVISQDTSAYGVDLKYRSGFWNGRPVKTRMTELCSALSELG
VWTRLHYVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPRILKAMKRPAFEDKTLARIKK
WREICPDLTLRSTFIVGFPGETEEDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANALGDA
VPDEVKQERWERFMAHQQQISAERLQARVGREIEVLIDEVDEDGAIGRSSADAPEIDGSV
YVASERPLKPGDLIRATVTDADEYDLWADAIER
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ctggccacggccaaggccgtcaccgcggatagcggcagcagccgcgcgccgcgcgtcggc
ttcgtttcgctgggctgtcccaaggcgctggtcgattccgaacgcatcctgacccagctg
cgcaccgaaggctacgacgtcacgccgtcctatgacgacgccgatgtcgtggtcgtgaac
acctgtggcttcatcgacagcgccaaggccgaatcgctggaagcgatcggcgaagcgctg
gccgagaacggcaaggtgatcgtcaccggctgcatgggcatcgaggaatccgccatccgc
gacgtgcatcccagcgtgctggcggtgaccggcccgcagcagtacgagcaggtggtgcgc
gccgtgcatcaggccgcgcctcccagcgccacgcacaacccctacctggatctggtgccg
ccgcaaggcatcaagctgacgccgcggcactatgcctacctgaagatttcggagggctgc
aaccaccgctgcagcttctgcatcatcccgtcgatgcgcggcgacctggtcagccgtccg
gtcggcgacgtgctgaacgaagcggaacggctggtgaaggccggcgtcaaggaactgctg
gtgatttcgcaggacaccagcgcctacggcgtggacctgaaataccgcagcggtttctgg
aacggccggccggtcaagacccgcatgaccgaactctgttcggcgctgtcggaactgggc
gtctggacccgcctgcactacgtctatccctacccgcacgtcgacgaagtgatcccgctg
atggcggaaggcaagatcctgccctatctggacatcccgttccagcatgccagcccgcgc
atcctgaaagccatgaagcgcccggcgttcgaagacaagaccctggcgcgcatcaagaaa
tggcgcgagatctgtccggacctgacgctgcggtccaccttcatcgtgggattccccggc
gagaccgaggaagacttccaatacctgctggactggatgagcgaagcccaactggatcgg
gtcggctgtttccagtattcgccggtggaaggcgcgcccgccaacgcgctgggcgatgcc
gtgccggatgaagtcaagcaggagcgctgggagcgcttcatggcgcaccagcagcagatt
tcggcggagcgcctgcaggcgcgcgtgggacgcgaaatcgaagtgctgatcgacgaggtc
gatgaagacggcgccatcggccgcagcagcgccgacgcgccggaaatcgacggcagcgtc
tatgtggcgtcggaacggccgctcaagccgggcgacctgatccgcgccacggtgacggac
gcggacgaatacgacttgtgggccgacgcgatcgagcgttga
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