KEGG   Bordetella genomosp. 8: CAL12_26695
Entry
CAL12_26695       CDS       T09515                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bgv  Bordetella genomosp. 8
Pathway
bgv00300  Lysine biosynthesis
bgv00470  D-Amino acid metabolism
bgv01100  Metabolic pathways
bgv01110  Biosynthesis of secondary metabolites
bgv01120  Microbial metabolism in diverse environments
bgv01230  Biosynthesis of amino acids
Module
bgv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bgv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CAL12_26695
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CAL12_26695
Enzymes [BR:bgv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     CAL12_26695
SSDB
Motif
Pfam: DAP_epimerase PmbA_TldD_2nd
Other DBs
NCBI-ProteinID: ARP84764
UniProt: A0A1W6YUU1
LinkDB
Position
5898049..5898966
AA seq 305 aa
MGDNVAIMWNFTKMHGAGNDFVVLDGVRQAITMTPERARALGDRHFGIGADQILVVEPAT
VADADFRYRIFNSDGSEVEHCGNGARCFVRFVHDTGLSDRNPLRAQIATGILVLDEGDDE
QVTVDMGITRFEPVDLPFDAAGLASHKEGVDTLYTLPLPATDAPAMPASVEISVVAISNP
HAVQVVDDVDSAPVHVIGPAVESHARFPRRVNAGFMQIVDRHNIRLRVYERGAGETLACG
TGACAAVAAGIRRGLLDTPVRVQARGGMLTVDWDGRALRMTGPATSVYTGAVDIDKLVFS
MALNR
NT seq 918 nt   +upstreamnt  +downstreamnt
ttgggcgataatgtcgcaatcatgtggaacttcacgaaaatgcacggcgccggcaacgac
ttcgtcgtcctcgacggcgtacgccaggccatcacgatgacgcccgaacgcgccagggcg
ctgggcgaccgtcatttcggcatcggcgccgaccagatactggtggtcgaacccgccacg
gtcgccgacgcggatttccgctatcgcatcttcaattccgacggcagcgaagtcgaacat
tgcggcaacggcgcgcgttgcttcgtgcgcttcgtccacgatacaggcctttccgaccgc
aatccgctgcgcgcgcagatcgccaccggcatcctggtgctggatgaaggcgatgacgaa
caggtcaccgtggacatgggcatcacgcgtttcgaaccggtggatctgcccttcgacgcc
gcgggactggcgtcgcacaaggaaggcgtggacacgctctacacgctgccgctgcccgcc
accgatgcgccggccatgccggccagcgtggagatatccgtggtcgccatctccaatccc
cacgcggtacaggtggtggacgacgtcgacagcgcgccggtccatgtgatcggcccggcg
gtggaatcgcacgcgcgctttccgcgccgggtcaacgcgggcttcatgcagatcgttgac
cgccacaacatccgcctgcgcgtctacgaacgcggcgctggcgaaacgctggcctgcggc
accggcgcctgcgccgcggtcgccgccggcatccgccgcggcctgctcgatacgccggtg
cgcgttcaggcgcgcggcggcatgctgacggtggactgggacggccgcgcgctgcgcatg
accggccccgcgacctctgtctacaccggcgcggtcgacatcgacaagctggtcttttcc
atggccttgaaccgttaa

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