Bordetella genomosp. 8: CAL12_26695
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Entry
CAL12_26695 CDS
T09515
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv00300
Lysine biosynthesis
bgv00470
D-Amino acid metabolism
bgv01100
Metabolic pathways
bgv01110
Biosynthesis of secondary metabolites
bgv01120
Microbial metabolism in diverse environments
bgv01230
Biosynthesis of amino acids
Module
bgv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CAL12_26695
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CAL12_26695
Enzymes [BR:
bgv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CAL12_26695
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
ARP84764
UniProt:
A0A1W6YUU1
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All DBs
Position
5898049..5898966
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AA seq
305 aa
AA seq
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MGDNVAIMWNFTKMHGAGNDFVVLDGVRQAITMTPERARALGDRHFGIGADQILVVEPAT
VADADFRYRIFNSDGSEVEHCGNGARCFVRFVHDTGLSDRNPLRAQIATGILVLDEGDDE
QVTVDMGITRFEPVDLPFDAAGLASHKEGVDTLYTLPLPATDAPAMPASVEISVVAISNP
HAVQVVDDVDSAPVHVIGPAVESHARFPRRVNAGFMQIVDRHNIRLRVYERGAGETLACG
TGACAAVAAGIRRGLLDTPVRVQARGGMLTVDWDGRALRMTGPATSVYTGAVDIDKLVFS
MALNR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgataatgtcgcaatcatgtggaacttcacgaaaatgcacggcgccggcaacgac
ttcgtcgtcctcgacggcgtacgccaggccatcacgatgacgcccgaacgcgccagggcg
ctgggcgaccgtcatttcggcatcggcgccgaccagatactggtggtcgaacccgccacg
gtcgccgacgcggatttccgctatcgcatcttcaattccgacggcagcgaagtcgaacat
tgcggcaacggcgcgcgttgcttcgtgcgcttcgtccacgatacaggcctttccgaccgc
aatccgctgcgcgcgcagatcgccaccggcatcctggtgctggatgaaggcgatgacgaa
caggtcaccgtggacatgggcatcacgcgtttcgaaccggtggatctgcccttcgacgcc
gcgggactggcgtcgcacaaggaaggcgtggacacgctctacacgctgccgctgcccgcc
accgatgcgccggccatgccggccagcgtggagatatccgtggtcgccatctccaatccc
cacgcggtacaggtggtggacgacgtcgacagcgcgccggtccatgtgatcggcccggcg
gtggaatcgcacgcgcgctttccgcgccgggtcaacgcgggcttcatgcagatcgttgac
cgccacaacatccgcctgcgcgtctacgaacgcggcgctggcgaaacgctggcctgcggc
accggcgcctgcgccgcggtcgccgccggcatccgccgcggcctgctcgatacgccggtg
cgcgttcaggcgcgcggcggcatgctgacggtggactgggacggccgcgcgctgcgcatg
accggccccgcgacctctgtctacaccggcgcggtcgacatcgacaagctggtcttttcc
atggccttgaaccgttaa
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