Bordetella genomosp. 8: CAL12_27445
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Entry
CAL12_27445 CDS
T09515
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv00300
Lysine biosynthesis
bgv00470
D-Amino acid metabolism
bgv01100
Metabolic pathways
bgv01110
Biosynthesis of secondary metabolites
bgv01120
Microbial metabolism in diverse environments
bgv01230
Biosynthesis of amino acids
Module
bgv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CAL12_27445
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CAL12_27445
Enzymes [BR:
bgv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CAL12_27445
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARP84181
UniProt:
A0A1W6YT39
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All DBs
Position
6064519..6065811
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AA seq
430 aa
AA seq
DB search
MNASISAPAQPAGYPHFHYRDGALCAEDVPLQLLADRLGTPLYVYSRAALRAAWESYRDA
IGDRDVLVCYGMKANSNLAVLKEFARLGAGFDIVSGGELQRVLAVGADPARIVFSGVGKQ
AWEMRKALETDVKCFNVESEAELNLLSDVATSMGRTARVSLRVNPDVDAGTHPYISTGLK
ENKFGVAIADAPRVYQAAASLPGIAVTGVDCHIGSQITDVSPYLDALDKLLDLIDGLAAA
GIHIEHLDLGGGLGIRYTDETPLRPAALLDQVYARLDARGLSHLKLIMEPGRSLVGNAGV
LLTTVQFLKHAEARNFAIVDAAMNDLIRPTLYDAWHGVLPVHPRGGATQEYDVVGPVCES
GDWLAKQRALAVERGDVLTIESTGAYGMVMAGNYNTRPRPAEVMVDGAQFHVIRQRETVE
DLMRGESTLP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttccatttccgcgccggcgcagccggccggctacccgcatttccactaccgc
gacggcgcgctgtgcgccgaggacgtgccgctgcagttgctggccgaccgcctgggcacg
ccgctctacgtctattcgcgggctgcgctgcgtgccgcctgggaatcctaccgcgacgcc
atcggcgaccgcgacgtcctggtgtgctacggcatgaaggcgaattccaacctggcggta
ctgaaggaattcgcccgcctgggcgccggcttcgacatcgtgtcgggcggcgaactgcaa
cgcgtgctggccgtgggcgcggatccggccaggatcgtgttctccggcgtgggcaagcag
gcctgggaaatgcgcaaggcactggaaaccgacgtcaagtgcttcaacgtggaatcggaa
gccgagctgaatctgctatcggatgtcgccacgtccatgggccgaaccgcccgtgtgtcc
ctgcgcgtgaatccggacgtggatgccggcacccacccgtatatctcgaccggcctgaag
gaaaacaaattcggcgtcgccatcgcggacgccccgcgggtgtatcaggcggccgcgtcc
ctgccagggatcgcggtgacgggcgtggactgccacatcggctcgcagatcaccgacgtt
tccccctacctggacgcgctggacaagctgctcgacctgatcgacggcctggcggcggcc
ggtatccacatcgaacacctggacctgggcggcggcctgggcatccgttatacggatgaa
accccgctgcggccggcggcgctgctggaccaggtctacgcgcgcctggacgcgcgcggc
ctgagccatctgaaactgatcatggagccaggccgctccctggtcggcaacgcgggcgtc
ctgctgaccaccgtgcagttcctgaagcacgccgaggcgcgcaacttcgccatcgtcgac
gcggccatgaacgatctgatccggcccacgctgtacgacgcctggcatggcgtgctgccg
gtccacccccggggcggggcgacgcaggaatacgacgtcgtggggccggtctgcgaaagc
ggcgactggctggccaagcaacgcgcgctggcggtggaacgcggcgacgtcctgaccatc
gaatccaccggcgcctacgggatggtcatggcgggcaactacaacacccgcccgcgtccc
gccgaagtcatggtcgacggcgcgcaattccacgtgatccgccagcgcgagacggtggaa
gacctgatgcgcggcgaatccacgctgccatga
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