Candidate division Kazan bacterium GW2011_GWA1_50_15: VE98_C0001G0029
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Entry
VE98_C0001G0029 CDS
T03988
Symbol
ine260
Name
(GenBank) pseudouridine synthase, 23S rRNA pseudouridine2605 synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bgw
Candidate division Kazan bacterium GW2011_GWA1_50_15
Brite
KEGG Orthology (KO) [BR:
bgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgw03009
]
VE98_C0001G0029 (ine260)
Enzymes [BR:
bgw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VE98_C0001G0029 (ine260)
Ribosome biogenesis [BR:
bgw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VE98_C0001G0029 (ine260)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF99
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AKM84488
UniProt:
A0A0G4BAS0
LinkDB
All DBs
Position
26323..27015
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AA seq
230 aa
AA seq
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MATERLHKFLARAGIASRRLAEDMIRHGRVNVNGVEATLGMSINPDIDKVTCDGKSVEQA
EAVIYAFNKPVGVTSTVRDRYAAKTVAEFFPKNQRVYPAGRLDKNSSGLLLITNDGELAN
QLMHPRYSHEKEYVVELSGVSSDNIKKFTHRFRLDGAQTQPMRVAKIKRVMVGRWLVNLV
LKEGKKRQIRRVANLLGYTVEQLARVRVGKLRLGDLRPGEWRIVKREDII
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaacgtctacataagtttctggctcgggcggggatagcaagccgacgatta
gccgaggatatgatccgacatggccgtgtcaatgtgaacggagtggaagcgactctgggc
atgtcgataaaccctgacattgacaaggtaacttgtgacggcaaatctgtggagcaggcg
gaggccgttatttacgctttcaataagccggttggggttacatctacggtccgggatcga
tatgcggcaaaaacagtggcagagttcttccctaagaaccaacgggtttatcccgcagga
cggctcgataagaatagctctgggttattgctgattactaacgacggcgagttggcgaac
cagctgatgcatcccagatacagccacgagaaggagtatgtggtggagctgagcggggtt
agttccgataacattaagaagtttacccatcgatttcgcttggatggcgcgcagactcag
ccgatgagggttgctaagatcaaacgagtgatggttggccggtggttagtgaacttggtt
ttgaaagaggggaaaaagcggcagatcagacgtgttgcaaaccttctaggctatactgtg
gagcagttggctcgagtgcgagtgggtaagttgcggttaggcgatctccggccgggtgag
tggagaattgttaagcgggaagatataatctag
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