Candidate division Kazan bacterium GW2011_GWA1_50_15: VE98_C0001G0210
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Entry
VE98_C0001G0210 CDS
T03988
Name
(GenBank) excinuclease ABC subunit B, excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bgw
Candidate division Kazan bacterium GW2011_GWA1_50_15
Pathway
bgw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VE98_C0001G0210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgw03400
]
VE98_C0001G0210
DNA repair and recombination proteins [BR:
bgw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VE98_C0001G0210
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VE98_C0001G0210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UvrD-helicase
SWI2_SNF2
AAA_7
DUF87
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AKM84667
UniProt:
A0A0G4BC80
LinkDB
All DBs
Position
196444..198465
Genome browser
AA seq
673 aa
AA seq
DB search
MTETRVVQGDGEGEAMKFKIKSKLKPAGDQPEAIRALVDGLKKKYRDQTLLGVTGSGKTF
TMANVIEKVQKPTLVIAHNKTLAAQLASEFREYFPDNAVHYFVSYYDYYQPEAYIPRTDT
YIAKDASINDEIDRLRNAATEALLTRKDVIIVASVSCIYGLGNPEVYQNESIELRAGKTY
KRERILRQLTDIQYQRNDINFVRGSFRVRGEVMEIFPAYAEVAYRFEWFGDKLERIRQVE
YLTGEILSEPKEVTIFPAKHFITPQDRLKGAIENIRTELRTRLKELTVANKLLEAQRLEQ
RTNYDIEMLQTVGYVSGVENYSRYLDGREAGSPPSTLLHYFPDDFLMFIDESHMTLPQIR
GMYNGDRARKEVLIEHGFRLPSAFDNRPLQFLEFEKLVNQVIYTSATPSQEELGNSKQIV
EQIVRPTGLVDPAVEVRPIEGQVDDLMEEIRKRVAVHQRVLVTTLTKKMAEDLTSFLQEA
DIKVQYIHSDVETLERIDILRDLRLGKYDVLVGINLLREGLDLPEVSLVAILDADKEGFL
RSDTALIQTFGRAARHLNGRVIMYADKITGSMQRALEETDRRREKQVEYNKKHKITPTTI
IKAIKSIHASTGEEELPPEQDINKFAKAANAEELKAMIRELEDEMDLAAKNLEFEKAAEL
RDRVELLRGELGK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacaagggtcgttcagggtgacggagagggagaagcaatgaagtttaagatt
aaatccaaattgaaacctgcgggagatcagcccgaagcaattcgggcgttggtcgatggg
ctcaaaaagaaatatcgggaccagaccttgctgggggtgacggggtcggggaagaccttt
acgatggccaatgtcatcgagaaggtgcagaagccgacgctagttatcgcgcacaataaa
acgctggcggcgcagttggccagcgagttccgcgaatattttcccgacaacgcggtgcat
tatttcgtgtcctactacgactactatcagccggaggcgtacatcccgcggaccgatact
tacattgccaaagatgcctccatcaacgatgagatagatagattgcgcaatgcagcgact
gaggcgcttttaactcgcaaggatgtgattattgtggcgtcagtgtcgtgcatctacggt
ttgggcaatccggaggtctatcaaaatgagagcatcgagttgagggcgggcaagacctac
aaacgggagcgaatcctgcggcagctgaccgatattcaataccaacgcaacgatatcaac
tttgttcgcgggagttttcgggtgcggggcgaagtgatggagatttttccggcttatgcg
gaagtggcgtaccgatttgaatggtttggtgataagttggagcggattcgacaggtggag
tatttgaccggcgagattttgagcgaaccaaaggaggtgaccatctttccggccaaacat
tttattaccccacaagaccgcttaaagggagcgattgaaaatattcggactgaacttaga
actcgtttgaaggaactgacggtagcgaataaattgctggaggcccagcggctggaacag
cgaacgaattatgatattgaaatgttgcagacggtcggatatgtttccggagttgaaaac
tattcgcggtatttggacggacgggaagccggctctccgccatcaactttgctccattat
tttccggacgattttttgatgttcattgatgaatcgcatatgactttgccgcaaattcgc
gggatgtataacggcgaccgggccagaaaagaagtgttgatcgagcacgggttccgcctg
cccagcgcgtttgataaccgcccactgcagtttttggaattcgagaaattggttaaccaa
gtgatttatacttccgcgacgcccagccaagaggaacttggtaatagcaaacaaatcgtg
gagcagatcgtgcggccgaccggtctagtggacccggcggtagaggtgcggccgatcgag
gggcaggtggacgacttgatggaagagattcgcaagcgggtggctgtccatcagcgggtg
ttggtgacaacgctaaccaaaaagatggccgaggatttaaccagctttttgcaggaggcg
gatattaaagttcaatacattcattcggatgtggaaaccttagagcggatagatattctc
cgcgacctgcggttgggcaaatatgatgtgctggtgggaattaacttgcttcgcgagggg
ctggacctaccggaggtatcgttggtggcgattttggacgcggacaaagagggcttttta
cggtcagatactgctttaatccaaacctttggacgggcagctcggcatttgaacggcaga
gtcatcatgtacgctgataaaattaccggctcaatgcaacgagcgctggaggaaaccgac
cgacggagagaaaagcaagttgaatataataagaaacataaaattacgccgacaacgatt
attaaagcgattaagagtattcacgcgtcaaccggcgaggaagaattgccgccggagcag
gatatcaataaatttgccaaggcggccaacgccgaagagctgaaggcaatgattcgcgag
ctagaagatgagatggacttggcggcgaagaatttggagttcgaaaaagcggcggagttg
agagatagggtagaattgctaagaggggagctagggaagtaa
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