Candidate division Kazan bacterium GW2011_GWA1_50_15: VE98_C0001G0278
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Entry
VE98_C0001G0278 CDS
T03988
Symbol
gyrB
Name
(GenBank) gyrase (subunit B) protein
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bgw
Candidate division Kazan bacterium GW2011_GWA1_50_15
Brite
KEGG Orthology (KO) [BR:
bgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgw03032
]
VE98_C0001G0278 (gyrB)
03400 DNA repair and recombination proteins [BR:
bgw03400
]
VE98_C0001G0278 (gyrB)
Enzymes [BR:
bgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VE98_C0001G0278 (gyrB)
DNA replication proteins [BR:
bgw03032
]
Prokaryotic type
DNA Topoisomerases
VE98_C0001G0278 (gyrB)
DNA repair and recombination proteins [BR:
bgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VE98_C0001G0278 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AKM84735
UniProt:
A0A0G4BB01
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All DBs
Position
complement(269074..271116)
Genome browser
AA seq
680 aa
AA seq
DB search
MAGKKKDEQSQTKSSGYGAKDIQVLEGLAPVRKRPGMYIGSTGIEGMHHLIWEVVDNSID
EAMAGHSTKVEVTLHADGKVTVVDDGRGIPVEKHPQTKKSTLETVLTTLHAGGKFGGAGY
KVSGGLHGVGLSVVNALSDYLRAEVTRDGKTHAQEYKQGKATGPVKVVNAKAQGHGTTII
FHPDKEIFGEAVVDGFSWKTVVEHLKQQAYLTKGIKAKVTDERTGESQLFYFEGGVQAYV
TDLNKNKTPLFEPPFYVDKERDGVRVEIGLQYTEDFNENLKAFANNIYNPEGGMHVVGFR
AALTRTLNNYGKKVGMVKDAKDALTGDDVREGLTAIISVKLTNPQFEGQTKAKLGNPEVR
TAVESVFNDYFGNFLEEHPSDARKMIGKTMLAAKARLAARAARETVIRKGALEGMTLPGK
LADCTEKDPAKSELYIVEGDSAGGSAKSGRSREFQAILPLRGKILNVERARLDKMLSNNE
VKALIIALGAGIADQFDIEKIRYHRVIIMTDADVDGAHIRTLLLTFFYRYMRPVIDRGYL
YIAQPPLFQVRLGKDTQWAYSDEERDAIIADLASKAAAKPAKGKKPAEEAAPSETEGETA
PEMAQTGRTPTIQRYKGLGEMNPEQLWDTTMDPAHRILLKVTIDDALKADEVFATLMGDE
VAPRKRFIQTHAKQVQNLDI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaagaaaaaagacgaacagtctcaaaccaagtcaagcggttatggggccaaa
gatatccaggttctagagggtctagcgcctgttcgcaagcgtcctggtatgtatatcggc
tcgaccggcatcgaggggatgcatcatctcatttgggaggtggtggacaactccattgac
gaagccatggccggccacagcaccaaagtcgaggtaactttgcatgccgacggcaaagtc
accgtagtggacgacggccgcggcattccagtagagaaacatcctcaaactaaaaaatcc
actttagaaacagtgctgaccacgctgcacgctggtggaaagtttggcggggctggctac
aaggtgtctgggggtctgcacggcgtcggcttgtcggtggtcaatgcgctgtcggattat
ttgagagccgaagtcactcgtgacggcaagacccacgcccaagagtacaaacagggcaaa
gccaccggtccggttaaagtagtgaacgccaaagcccaaggtcatgggacaaccatcatt
tttcaccccgacaaagagatctttggagaagcggtagtggatggattttcgtggaagacc
gtggtggaacatttgaaacagcaggcctatctgactaaagggattaaagccaaagtcacc
gacgagcgtaccggtgaatcccagctgttctattttgagggtggggtgcaggcctatgtc
actgatctgaacaaaaataaaactccgctgttcgagccgcctttttatgtggataaagaa
cgggacggtgttcgcgtggagatcggtttacaatacacagaggatttcaacgagaatctt
aaggcctttgccaacaacatctacaaccccgaaggcggcatgcatgtggtgggatttagg
gccgcgttgaccagaactctgaataactacggcaaaaaggtcggtatggtcaaagacgcc
aaggacgccttaaccggcgatgatgtccgcgaagggttgaccgccatcatctccgtgaag
ctgactaatccgcagttcgagggtcaaaccaaagctaagctcggcaacccagaagtccgc
accgcggtcgagtcggtattcaacgactactttgggaacttcctagaagagcaccccagc
gatgcgcggaagatgataggtaaaactatgttggcggctaaagcccgactggccgctcga
gccgcacgcgaaacagttatccgcaaaggtgccctagaagggatgactttgccagggaag
ctggctgactgtactgaaaaagatcctgcaaaaagcgaactctacatcgtagagggagat
tcggccggcggtagcgccaaaagcggccgctccagagagttccaagccatcttacctctg
cggggaaaaattttaaatgtggagcgagcgcggctggacaaaatgctctccaataacgag
gttaaggctctcattatcgctttgggggctggcatcgctgatcagttcgatattgaaaag
atccgttatcatcgagtgatcattatgacagacgccgacgtagacggtgctcacatccga
actctgcttttgacgttcttctatcggtatatgcgcccagtgatcgaccgcggctatctc
tatattgcgcagccgccgctctttcaggtgcgtctgggcaaggatacacaatgggcatat
agcgatgaagaacgagacgcgatcatagctgatttggcgagtaaggcagctgccaagcca
gccaaagggaagaagcctgctgaagaagcggcccccagcgaaacagaaggggagactgcc
cccgagatggcgcagaccggtcgcacacccacgatccagcgctacaaaggtttaggcgaa
atgaaccccgaacaactctgggatactaccatggatccggcgcaccgcatcctgctgaag
gtaactatcgatgacgctctcaaggccgacgaggtgttcgccaccctgatgggcgacgaa
gttgcaccccgcaagcgtttcatccagacccacgccaaacaggtccaaaatctcgacatc
taa
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