KEGG   Candidate division Kazan bacterium GW2011_GWA1_50_15: VE98_C0001G0282
Entry
VE98_C0001G0282   CDS       T03988                                 
Name
(GenBank) polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
bgw  Candidate division Kazan bacterium GW2011_GWA1_50_15
Brite
KEGG Orthology (KO) [BR:bgw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgw03400]
    VE98_C0001G0282
Enzymes [BR:bgw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VE98_C0001G0282
DNA repair and recombination proteins [BR:bgw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VE98_C0001G0282
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AKM84739
UniProt: A0A0G4BA31
LinkDB
Position
complement(275341..277704)
AA seq 787 aa
MNYSEYIVLDVETTGVDARVDDVIEFAAVRLDAKGEVIDQLDFLIGTQQPISSTVMALTG
IRPEDLSGQPEISTVIDKIRDFVGTAPIVGHNIGFDVEFLNAKGAELKNPVLDTLELAYT
ILPAQSYYSLEFLSHRFGFAHQPAHRAMADVLATTDLFRYLVGQVADLQATTRKQIISLV
PADKWTWGWLVNEPPTFSRLTTHQIDEGESDQLAAEVKRGKAWAEEVLQAATDPINLVET
HFAIAGDALALACAVVSAPAIVIVPDRLLYRINWAKLSQTVGAKVVPRYPSSLQYRTDAE
VDLANSQESLSALEAQLITKVVIWRIEWGMDYSQLYLSREEQYQWEQKLAPVTPLDEPTD
AVVVAAAGNLMDIGSFQNRVVVTARPLMMEDAAFADQSRIFSVNYFTAAISSRRDFVHQY
VRGSDVKLADSLFKTLNHLSGSFQTITQSLVEIYTAHPPTSVYERNIELASEWLPASLSE
ALREAAGHVQKYLEGISGVSAPAALSQIERTRKLLVDLQLVAELSATHRYFLFADANRFF
LDIVPTQFDPQPIRRLIGTAGRFIATGSSLSAGDQFSYLRGLFGDSHTQTLGLEPRTELL
VAEDMPSGTDYYAALQRFASQVLSQPGRTVLLANSAYEARQLFEDVFTGGTTTGTVIESY
DTVGNVSLVPALVAQHKKFFLIGHYAWFDRLSPYANAFDRLLLGRLPFEAVSRPQAKVLA
DADEGFNTYTLPRGIMRLKEVLHQAKLTGRPIAFLDSRILSRDYGRQVTAALLDFTIVPQ
GSDRIIE
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgaactactcggaatacatagttttagacgtagagaccaccggcgtggacgcgcgggtg
gatgatgtgatcgagttcgccgccgtgcggctagatgctaaaggagaagtaattgaccag
ttagattttctgatcgggacgcagcagcctatctcgtctacggtcatggccctgaccggt
attcgtcccgaggatttgagcggccaaccagagatcagcacagtgatcgataagatccga
gattttgtcggcactgccccgatcgtcgggcataatattgggtttgatgttgaatttctt
aacgctaaaggagccgaactaaaaaacccggttttagatactcttgaactggcctacacg
atcttgccagcccagtcgtactatagtttagagtttttatcccaccgatttgggtttgcc
catcaaccggcccaccgcgccatggccgacgtactcgccaccacggatctgtttcgctat
ttggtcgggcaagtggctgatttgcaggcaactacgcgaaagcaaatcatcagtcttgtc
ccagcagacaagtggacgtggggatggttagtgaatgaaccgcctaccttctctagactg
accacacaccaaatcgacgagggcgaaagcgatcagctggccgccgaggttaagcgaggg
aaggcgtgggctgaggaagttcttcaagccgcgaccgacccgatcaatctagtcgaaacc
cactttgctatcgctggggacgctctggccttagcttgcgctgtggtcagtgcccctgcc
atcgtcatcgtgccagacaggctgctttaccgcattaattgggcaaagctcagtcagaca
gtcggggccaaagtcgtgccccgttatccgtccagcctgcagtatcggactgatgctgaa
gttgatctagctaacagccaagaaagtttgagtgccctagaagcacagctgatcactaaa
gttgtgatctggcgaatcgagtgggggatggactacagccagctctatctctcccgcgaa
gaacagtaccaatgggaacaaaaattggctcccgtaactcctctggatgaacccaccgac
gcggtggtcgttgccgctgctggcaacttgatggatatcgggagcttccaaaacagagtg
gtcgtaaccgctcgccccctgatgatggaagacgccgcctttgccgatcagtcacgcatt
ttttccgtcaactactttaccgccgctattagtagccggagggactttgtccatcaatat
gtccgcgggtctgacgtaaagttggccgacagtctatttaaaactcttaaccatttgagc
ggttcattccaaacgattacccagtctctggtagagatctatactgcccatccgcccacc
tcggtttacgaacgcaatatcgaactggcgtcagagtggttgcccgcgtcattatcggaa
gccctgcgggaggccgctggacacgtgcaaaaatatctagaggggattagcggggtgtcc
gcccccgccgccctatctcagatcgaaaggacgcgtaaactactagtcgatctgcagctg
gtagccgagttgtcggccactcatcgctactttctcttcgccgacgctaatcgatttttt
cttgatatagttccaacccagttcgatcctcagcctatccgccgacttatcggaaccgcc
gggcggtttatcgcgacaggctcaagcctctcggccggtgatcagttcagttatctgcga
gggttgtttggggacagtcatactcaaactttaggtcttgaacctaggaccgagctactg
gtcgcggaggatatgcccagcggcaccgactactacgccgcccttcagcggtttgcttcc
caggtactgtcccagcccggccgtacagtcctactggccaactcggcctatgaagccagg
cagttatttgaagatgtatttactggagggactacgacaggaacggttatagagagctac
gacacggtcggtaacgtctcgctggtaccagccctggtggcacagcacaaaaagttcttt
ttgatcgggcattacgcctggtttgatcgtttatcgccgtacgcgaatgcgtttgaccgt
ctgcttctgggccggctcccattcgaggcagtttctcgcccccaagctaaggtgttggcc
gatgctgacgaggggttcaacacctataccttaccgcggggaattatgcgcttaaaggag
gttctccaccaggcaaagctgaccggcaggccgatagcttttctggatagccggatactc
agccgggactatggccggcaggtgactgcggcgttgttagatttcacaatagtgcctcaa
gggtctgaccgtatcatcgaataa

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