Candidate division Kazan bacterium GW2011_GWA1_50_15: VE98_C0001G0579
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Entry
VE98_C0001G0579 CDS
T03988
Symbol
dnaE
Name
(GenBank) polymerase III alpha subunit protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bgw
Candidate division Kazan bacterium GW2011_GWA1_50_15
Pathway
bgw03030
DNA replication
bgw03430
Mismatch repair
bgw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VE98_C0001G0579 (dnaE)
03430 Mismatch repair
VE98_C0001G0579 (dnaE)
03440 Homologous recombination
VE98_C0001G0579 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgw03032
]
VE98_C0001G0579 (dnaE)
03400 DNA repair and recombination proteins [BR:
bgw03400
]
VE98_C0001G0579 (dnaE)
Enzymes [BR:
bgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VE98_C0001G0579 (dnaE)
DNA replication proteins [BR:
bgw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VE98_C0001G0579 (dnaE)
DNA repair and recombination proteins [BR:
bgw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VE98_C0001G0579 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF7318
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKM85033
UniProt:
A0A0G4BC79
LinkDB
All DBs
Position
581620..585132
Genome browser
AA seq
1170 aa
AA seq
DB search
MDFVHLHVHSHYSLLDGLSKVPDLVSKAKTQGAIALALTDHGVMYGAIEFYQECRKAGIK
PIVGNEIYVTQGQITDRELKRGEKNFYHLTLLAKNYAGYVNLMRLTTEAHLRGFYYRPRV
DHETLGKYANGLICLSGCLGGELAQTILHGDLDKAKQIALWHKNLFGEDYYLELQYHPNI
ADQQTVNDALIGLSQELNIALVVTTDSHYLCAEDAEAQDVLLCVQTGAKVEDSNRFSMQG
ELFDLKDPKEIIEAFKHVPEAVANTLKVAEKCELEIPTGGMILPSFDVPDGETLQSCLDR
EVERGLGRRFGDVIPTEVRERVEYEMAVVTQMGYQSYFLIVADFVNWARNKGILVGPGRG
SAAGSMVSYALQITNINPLLHGLLFERFLNPERISMPDIDLDFADDRRGEVIDYVIEKYG
RNRVAQIITFGTMASRAAIRDVGRAIGMTYGEVDRIAKMVPPPQQGKHTPLAIHLENVQE
LKDIYASDPRAKRLLDLAQKMEGTIRHASTHAAGVVIGDKDLTHYVPLQYSPTGDRTLIT
QYSMYPVETIGLLKMDFLGLKNLTIIKNALRIIRKIHDQDVDLDALPFDDAKTFELLAAA
NTTGVFQLEGEGMRRYLKELKPTVFSDIAAMIALYRPGPIELIPDFIARKQGRKKIEYLH
PKLEPILDDTYGVAVFQEQVLQIARDLCGFTLGEADVLRKAIGKKIPKLLAEQKEKFISG
ALKNGINDSVAQQLFHFVEPFALYGFNRAHTTSYATISYWTAYLKAHFPNAFMAALMTSD
QQDLDKIAKNIAECEHMGIKVLPPSVNHSFTGFAVVKETGEITFGLNAIKNVGQKVSDLI
AEERQTHGRYVDLMDFVKRAGHEVINRKTLESLALAGALDEFADRKVIFNNLDHILSFAT
SYYQRQDSSQEMLFGEAEVGGSEIIQLHPSETVTDRERLTWEREYLGTFVSRHPLKEIMP
KLEGIVRPVSSLSNLDDNQTARVAGVVTRVQKVFTKTGDAMVFVTMEDLGANIEVVVFPK
VMEQNPALWERDKILLVTGKVNVKEHADAQGDSIVMVAEPKIIASEVAEVNDAYIEQLQR
AEMMTATPSQPRTIIEERAGELLIKLPKGFGNGQLQGLKSILEQHPGEVSVTLELFAQGR
WQTVKTSTRARMTPALEQAIVNLTTEQLTN
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgcatctgcatgtgcacagtcactatagtttgctcgacggtttgagcaag
gtcccagacctagtgagcaaggctaaaacccagggcgccatcgcgttagccttaacggat
catggggttatgtatggcgcgatcgagttttatcaagagtgccgcaaggccggaattaaa
ccgatcgtaggcaacgagatctatgtcacgcagggccaaattactgacagagagctcaag
cgcggagagaaaaacttttatcatctgactctgctggccaaaaactacgccggatacgtc
aatttgatgcggctgaccaccgaagcgcacttgcgtggtttttattatcgaccgcgggtc
gaccatgagaccttagggaaatacgctaatggtttgatctgtttatcaggctgtctagga
ggcgagctggcccagactattttgcacggcgacttggataaggctaagcaaatagccctg
tggcacaagaacttattcggtgaagattactatctagagttacagtatcatcccaatatc
gccgatcaacaaaccgtgaatgatgccctgattgggctaagtcaggaactaaatattgct
ttggtggtgaccactgattcgcactacttatgcgccgaggacgccgaggcccaggatgta
ttgttgtgcgtacagactggagcaaaggtcgaggatagtaatcgattttctatgcaaggc
gaattatttgatctcaaagaccccaaggagatcatagaagcatttaagcatgttccggaa
gcggtggccaacacattgaaagtagctgagaaatgcgagttggagattccgacaggaggg
atgatcttgccatcttttgacgtgccagacggagaaacgctgcagtcttgtctggacaga
gaagttgagcgcgggcttgggcgtcggtttggagacgttatcccgaccgaagtgcgcgag
agggtggagtacgagatggcggtagttacccagatggggtaccagagttattttttgatc
gtggccgattttgtcaattgggccaggaacaaagggatattggttggcccaggccggggt
agcgcggccgggagcatggtgtcgtatgcgctgcagattactaacatcaatccattgctt
cacggtttgctgttcgaacgatttctaaaccccgagcggatctcgatgccggatattgat
ctagatttcgctgatgataggcgaggcgaggtaatcgattatgtaatagagaaatatggt
cggaaccgagtagcccagatcatcacctttgggacaatggcctcccgggcagcgatccga
gatgtgggccgggcgatcggaatgacctacggcgaggtagatcggatcgccaaaatggtg
ccaccgccacaacaagggaaacatacgccgttagcgatccatctggaaaacgttcaagag
cttaaagatatttatgccagtgacccgcgggctaagcggctgctcgacttggcgcagaaa
atggaggggacgatccggcacgcttctacacatgcagcgggggtggtgatcggggacaag
gatctgacccactacgtcccgttacaatactcaccaaccggtgaccggacgctgataact
cagtactcgatgtatccggtcgagacgatcgggcttttaaagatggactttttgggcttg
aaaaatctgaccattattaaaaatgctctgcggatcattcggaagatccacgatcaagat
gttgatctggatgcactgccgttcgatgacgctaaaacttttgaactgctggcggcggct
aacactaccggggtattccagctggagggcgaggggatgcgccgttatctgaaagagctg
aagccaaccgtgtttagcgatatcgccgccatgatcgcgctctatcgcccggggccgatc
gagctgatcccagactttatcgctagaaaacaaggccgcaaaaagatcgaatatctacat
cccaagttggaaccgatcttggacgatacatacggggtagcggttttccaggagcaggtc
ttacaaatagccagggatctatgcggcttcactctgggtgaggcagacgttctgcgcaaa
gctattgggaaaaagatccctaaactgctggctgagcagaaagaaaagtttattagcgga
gcgcttaagaacggaattaacgatagcgtagcgcaacaactatttcattttgtcgaaccg
ttcgctttgtatggatttaaccgagcgcatactaccagttacgccacgatatcttactgg
acggcttatttgaaggcccacttccctaacgcattcatggcggcgttgatgacctctgat
cagcaggacttggacaaaatagccaagaatatcgccgagtgtgaacatatggggatcaag
gtgctgccgccgtcagtgaatcatagttttaccggtttcgccgtggtcaaggagacgggc
gagatcacgtttggtttgaatgcgatcaaaaatgttgggcagaaagtttctgatctgatt
gctgaggagcgccaaacccacggtcgctacgttgatctcatggactttgttaagcgggcg
ggccatgaggtgatcaatcgtaagactctagagagtctggcgttggcgggtgcgttagat
gaattcgctgatcggaaagtgatattcaataatctggatcatattttaagttttgccact
agctactaccaacggcaggactcatctcaagaaatgttgtttggtgaagctgaagttggc
gggtcagaaattattcagctacatcctagcgagacagtaacggatcgagagcggttgact
tgggagcgagagtatctaggcacttttgtatcgagacatcctctgaaagagatcatgccg
aaactggaaggtatagtccgtccggtgagcagcctatctaatttggatgataaccaaacc
gctcgagtagcgggagtggtaacgcgagtgcagaaggtgtttaccaagacgggggatgcg
atggtctttgtcacaatggaagatctgggcgccaacattgaggttgttgttttcccgaaa
gtgatggagcaaaacccagcgctatgggagcgggacaagatcttactagtaactggtaag
gtgaatgtcaaagaacacgccgacgcacagggagacagtattgtgatggtggctgaacca
aagattattgctagtgaagtggcggaagtgaacgatgcttatatcgagcagttgcaacgg
gccgaaatgatgacagccacacctagccaaccacgcacgatcattgaagagcgggcgggg
gaacttctgattaaactaccaaagggattcggcaacgggcagctgcaagggctcaagtct
attttggagcagcacccaggtgaagtcagcgtaactctagagctgttcgctcagggccgg
tggcagacagtgaaaaccagtactagggccaggatgaccccggcattagaacaggcgatc
gttaatttgacgaccgagcaacttaccaattag
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