Bifidobacterium pullorum subsp. gallinarum: ESN35_02875
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Entry
ESN35_02875 CDS
T06507
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bgx
Bifidobacterium pullorum subsp. gallinarum
Pathway
bgx03030
DNA replication
bgx03430
Mismatch repair
bgx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ESN35_02875
03430 Mismatch repair
ESN35_02875
03440 Homologous recombination
ESN35_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgx03032
]
ESN35_02875
03400 DNA repair and recombination proteins [BR:
bgx03400
]
ESN35_02875
Enzymes [BR:
bgx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ESN35_02875
DNA replication proteins [BR:
bgx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ESN35_02875
DNA repair and recombination proteins [BR:
bgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ESN35_02875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
tRNA_anti_2
DUF5487
Motif
Other DBs
NCBI-ProteinID:
QAY32489
UniProt:
A0A087AR98
LinkDB
All DBs
Position
CACC514:754061..757615
Genome browser
AA seq
1184 aa
AA seq
DB search
MAGSGSDFVQLHNHTHYSLLDGASKIPDLVRRTKELGMTAVGIADHGNMHGAYEMWSEAV
KVGVKPIIGIEAYTTPETARQDKTRVHWGTEAQRSDDVSGGGLIAHLTLWAETDEGLKNL
LKASSVANLEGRVMRYPRMDNEVLSTYSKGVICGSGCPSGIIQTRLRLGQFDEALRYAGE
LQDIYGRDNFYIELMDHGLKIETQVTNELLDIAKRLNAPLLATNDSHYVLEEDRGAQDAM
LCINSGSRLDDPDRFKFDGSGYYLKSAEEMRALFKDLPEACDNTIEVAERCNVMFDDGED
GAFMPQFACPEGWDETSLFLKQVEEGLEKRYKGNVPMDVLKQADYECGVICQMQFCGYFL
VVSDYINWAKNNGVMVGPGRGSAAGSMVAYAMGITELDPLQHGLIFERFLNPERVSLPDI
DTDFDPEGRMRVLEYVADKYGHDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEHVTKA
LPPSKNGKDASLKEIFDPTSKRYAEAREFREMYESEPDAHRIIDEAKGIEGLIRQTGVHA
CATIMGSEPITDTSPLLERTDGTVTTTFEYHTCETLGLVKMDFLGLSNLTVIRDTLRNIE
RNGKPAIDYREIPLDDKETYQLLSRGDTLGVFQLDSDGMRSLLKSLKPDNFNDISALIAL
YRPGPMDVDSHNNYAKRKNGLQKITPIHPEVAEALAPVLDETYGLIVYQEQVQSSARILA
GYSLGRADVLRRAMGKKKPEVLAKEQVPFFAGMKEHGYSEEAAQAVWDIFVPFAGYAFNK
SHSAAYGLISYWTAYLKTHYPVEFMAALLQNERTNKDKTALYLGEARRMGIQVLPPDVNE
SVLEYSAVGDVVRFGLGAIRNVGDQPVADIIAERSGPRGKFVNFMDFIRRVPLSALNRRL
VESLIKAGAFDSIDPNRRALYQIHEAAIDSVVGLKRKQAEGQFDLFSDVDGGDAEDMGDA
GVTVPDVEEWDKKTKLNFEREMLGLYVSDHPLSGMQAVLASLREMSIAHLIDRAKTMPDR
MQVTIAGLVTGVDRRVSKKGNAWAIVTIEDMESSIQCMFFGKVYEAAAADLAIDTVVRIR
GMVEVRDESVSLRATEMDVPTLEAVDERPLVITLPQVALNRAHVMQLGQILTNHPGYCEV
KLAIVDDKGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggctggatcaggtagtgacttcgtgcaactgcacaaccatacgcattactcgttgctg
gacggtgcgtccaagattcccgacttggtgcggcgcaccaaggagctgggcatgacggcc
gtcggcatcgccgaccacggcaatatgcacggtgcgtacgagatgtggagcgaggccgtc
aaggtcggtgtcaaaccgatcatcggcatcgaggcttataccacgccggaaaccgccagg
caggacaagacccgcgtgcattggggcaccgaggcgcagcgctccgacgacgtgtccggc
ggcggcctgatcgcccacctgacattgtgggcggaaaccgatgaaggcttgaagaacctg
ttgaaggcatcctcggtggccaatctcgaaggccgcgtgatgcgctatccgcgtatggac
aacgaggtgctctccacctattccaagggcgtgatctgcggttcgggctgtccttcgggc
atcatccagacccgtctgcgcctcggtcagttcgatgaggcattgcgctacgccggcgaa
ctgcaggacatctacggccgtgacaacttctacatcgaactgatggaccacggtctgaag
atcgaaacccaggtgaccaatgaactcctggacatcgccaaacggctcaacgcgccgctg
ttggccacgaacgactcccattacgtgctggaggaggatcgcggcgcacaggacgcgatg
ctgtgcatcaactccggttcgcggctggatgaccccgaccgtttcaaattcgacggttcc
ggctactacctgaaatccgccgaggagatgcgtgcgctgttcaaggacctgcccgaggca
tgtgacaacacaatcgaggtggccgaacgctgcaacgtgatgttcgacgacggcgaggac
ggcgctttcatgccgcagttcgcctgcccggaaggctgggacgagacctcgctgttcctc
aagcaggtggaggagggcctggagaagcgctacaagggcaatgtgccgatggatgtgctg
aagcaggccgactacgagtgcggcgtgatctgccagatgcagttctgcggctacttcctg
gttgtctccgactacatcaactgggcgaagaacaacggcgtgatggtcggccccggccgt
ggctccgccgcaggctcgatggtcgcctacgccatgggcatcaccgaactcgacccgttg
cagcatggcctgatcttcgaacggttcctgaaccccgaacgtgtgtccctgccggatatc
gataccgatttcgacccggaaggacgcatgcgtgtgctggaatacgtggccgacaagtat
ggtcatgacaaggtggcccagtgcgtgatctacggcaccatcaagaccaagcaggcgttg
aaggattcggcccgcatcatggggtacgaattctccgtcggcgagcatgtcaccaaggcg
cttccgccgagcaagaacggtaaggacgccagcctcaaggagatcttcgacccgacatcg
aagcggtacgcggaggcgcgcgagttccgcgagatgtacgagtccgaaccggatgcgcac
cgcatcatcgatgaggccaaaggcatcgagggcctgatccgtcagaccggtgtgcatgcc
tgcgccactatcatgggctccgagccgatcaccgacacgtcgccgttgctggaacgcacc
gatggcacggtcaccaccaccttcgaataccacacctgcgaaacgctgggtctggtcaag
atggacttcctgggcctgtccaatctcacggtcatccgggatacgctgcgcaacatcgag
cgcaacggcaagccagccatcgactaccgagagattccgctggacgacaaggagacctac
cagctgctgtcgcgcggcgatacgctgggcgtcttccagctcgattccgacggtatgcgt
tcgctgctcaaaagcctcaagccggataacttcaacgacatctcggcactgattgccctg
tatcgaccgggcccgatggatgtcgattcgcacaacaactacgccaagcgcaagaacggc
ctgcagaagatcacgccgatccatccggaggtggccgaggcgttggcccccgtgctggac
gagacctatggcctgattgtgtatcaggagcaggtgcagtcgtccgcgcgtatcctggcc
ggatattcgctcggccgagccgacgtgctgcgtcgagccatgggcaagaagaaacccgag
gtgctggccaaggagcaggtgccgttcttcgcgggcatgaaggagcacggctattccgag
gaggcggcccaggccgtctgggacatcttcgtgccgttcgccgggtacgcgttcaacaaa
tcgcattccgccgcatacggtctgatctcctactggaccgcgtatctgaagacccactat
ccggtggagttcatggcggccctgctgcagaacgaacgtaccaacaaggacaagacggcg
ctgtatctgggcgaggccaggcgtatgggcatccaggtgctgccgcccgatgtgaacgaa
tcggtgttggagtactccgccgtcggcgatgtcgtccgtttcggcctgggcgcgatccgc
aacgtcggcgatcagccggtggccgacatcatcgccgagcgcagcggcccgcggggcaag
ttcgtcaacttcatggacttcatccgtcgtgtgccgttgagcgcgttgaaccggcgtctg
gtcgaatccctgatcaaggccggtgccttcgactccatcgacccgaaccgcagggcgttg
taccagattcatgaggcggccatcgactcggtggtcgggctcaagcgcaagcaggcggag
ggtcagttcgacctgttctccgatgtcgacggcggcgatgccgaggatatgggcgatgcc
ggtgtcaccgtgccggacgtggaggagtgggacaagaagaccaagctcaacttcgagcgc
gagatgctgggcctgtatgtgtccgaccatcccctgagcggcatgcaggccgtgcttgcc
agtctgcgggagatgtcgatcgcgcatctgatcgaccgcgctaagaccatgcccgaccgc
atgcaggtcaccatcgcgggcctcgtgaccggcgtggaccggcgcgtgtccaagaagggc
aatgcatgggccatcgtcacgatcgaggacatggaaagctcgatccaatgcatgttcttc
ggcaaggtgtacgaggcggcggccgccgatctggccatcgacaccgtggtgcgcatccgc
ggcatggtggaggtgcgtgacgagagcgtgagcctgcgagccaccgagatggatgtgccg
acgttggaggcggtggacgaacgtccgctcgtcatcacgctgccgcaggtggcgctcaac
cgcgcccatgtcatgcagctggggcagatcctgaccaatcaccccggctactgcgaggtc
aagctcgccatcgtggacgacaagggcaacgcgcaggtgctgaccttcggcgaccggttc
cgcgtcaaacgcgacacctcgctgttcgccgagatcaagatcctcttcggtcctagctgt
ctgcctgcggcgtag
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