KEGG   Bifidobacterium pullorum subsp. gallinarum: ESN35_03925
Entry
ESN35_03925       CDS       T06507                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bgx  Bifidobacterium pullorum subsp. gallinarum
Brite
KEGG Orthology (KO) [BR:bgx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgx03400]
    ESN35_03925
Enzymes [BR:bgx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ESN35_03925
    5.6.2.6  RNA 3'-5' helicase
     ESN35_03925
DNA repair and recombination proteins [BR:bgx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ESN35_03925
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C ResIII PhoH Cas3-like_C_2 DUF6406
Other DBs
NCBI-ProteinID: QAY32666
UniProt: A0A4P6DSR2
LinkDB
Position
CACC514:986449..991347
AA seq 1632 aa
MYECLDLFSEPTGAWFRHAFAQGETAAQRQAWPVIAKGDDALVIAPTGSGKTLSAFLYAI
DRLMNHASDAREAGGSRSSKPAKGVKVLYISPLKALGVDVARNLEAPLAGIAAQCKAMGL
NPPSIRVATRSGDTTAQERRAIASHPPDILVTTPESLYLILTSKARRILSTVRTVIVDEI
HAIAGTKRGAHLALSLERLDMLTAEPAQRIGLSATVRPAEAAARFLGGARAVTIVDVQSH
PAMELKVVEPVEQMPESADSTNRARVVGGGKPSGLPSISGVTPAMMRLAERQGTVTASPG
PAQGPLRARADVGAGETASVPGDATSADERAGSVWPAVERSILNEILSHHTTLVFVNSRG
LAERLTARLNDLYAAIPGHGDADAPRSDEPYAGQRHFHPMAGPSTNLIHPHAPEDTIAMA
HHGSVSKDRRKRIEEDLKHGRLRCVVATSSLELGIDMGSVDLVIQVSPPLSVSSGLQRVG
RADHQVGGVSHALFYPLTREQIIGAAATVECMQTGDIEPLSIPRCPLDVLAQHTVAAAAM
EDLNPDDWYQTVRRAAPFADLDRSVFDSVLGMLTGAYDSEAFTAFRPSLMWNHEEHLISA
RPGAQRLAVTSGGTIPDRGQYTVVLPEQEAGKGPRRVGELDEEMVYESRIGDIITLGTST
WQIQDITHDRVVVVPAPGRTARLPFWHGEGFGRDAGFGEMQGRFVRDMVNGLHDGDCTVA
SVGVAPFDYPASSDCAASSDGMTSSSDAAAFDDGTTDRLRADGLDGNAISNLAQLLHEQR
IATGAVPTDRTLVVERCPDEEGDWRIVLHSPYGKRVHEPWAMIVGNRIKQRYGYDGQVYA
CDDGIILLLPQSDGHIPAAELFAVDPDDIQRLVAEQVGESVLFTARFRECAARSLYLPCT
DPGKRVPLWQQRLRGVQLLNAARTQCNFPLLLETTRECLQDVYDLPALRRLMTRLSNGEI
DVVDVETQTPSPFAETIMFGYVGQVMYQYDQPHAERSAALLSLDFDALERLLGTADMTAV
LDPDVIHDVERELAGRTFWNELDERDVAGRVARYAKTHGPFTVDMMMVELHLDAERAVRE
LDGLKARGEVLTGLFMTNPGRGNGSRSTVDDAQPGEGEESYDGMGKLVGGMEPDVEMADD
HRPVQYLHRDVFRRIRARSLNKAREAIKPVAPAVYQALLLDRQGVGPVGGERYDGVDGLM
RVVEQLEGVALPLPIWEGAVFPARVRGYQPAMLDELLASGDVVWTGEKTAGTKAKEPGRI
AFHPADSELLCNTAAADATGHPSDGAPDDTMTGDTAPDDDAGQALESVRTLPDAILHVLA
AGGAFRAERLAELVRAAWRPDTESVDPETGEIRPSAWSNSQFEDALWSLVWQGAVTNSSL
TPVRAMASAVSSHVTRSVSVGRTRRRARVTVQVPVLMQGLWSAVPTVTATAEQRSLARIE
VLLDRYGIIATPLIDAEDVPGGFSALYPVLRRMEEHGTLVRGMFVQGFGAAQFARRDTVD
QLRHAGEGHSRSCVAIEVMDPANLTGAAVAWPQYGGQASKPLRRAGGMVVLDHGTPVVYA
AVKGHHLTTFTDDGDTLRRAFAEFAYALQRRPSGSITFADLNGEPLTARTEAARILHAAG
FTPCPQGMKLYR
NT seq 4899 nt   +upstreamnt  +downstreamnt
atgtacgaatgtctggatctgttctccgagcccaccggggcatggttcaggcatgcgttc
gcgcagggggagacggcggcgcagcgtcaggcatggccggttatcgcgaaaggggatgac
gcgctggtcatcgcgccgaccggttccggcaagacgctctccgcgttcctgtacgccatc
gaccggctgatgaaccatgcatcggatgcgcgggaggcgggcggctcccgctccagcaaa
cccgccaagggcgtcaaggtgctgtatatctcgccgttgaaggcgctgggcgtggatgtg
gcgcgcaatctggaggcgccgttggcgggcatcgccgcccaatgcaaggccatgggcctc
aacccgccgtcgatccgagtggccacgcgcagcggcgacaccacggcgcaggaacggcgg
gccatcgcctcgcacccgccggacatcctggtcaccacacccgaatcgctgtatctgatc
ctcacttccaaggcgcggcgcatcctgtccacggtgcgcaccgtcatcgtggacgagatc
catgccatcgccggcaccaagcgtggggcgcatctggcgttgagcctggaacggctggat
atgctgaccgccgaacccgcacagcgcatcggactgtcagccacggtgcgtccggccgag
gccgcggcgcggttcctcggtggcgcgcgggccgtcaccatcgtcgacgtgcagtcgcac
cccgccatggaactcaaggtggtcgaaccggtcgagcagatgcccgaatccgccgattcc
acgaaccgggcgcgtgtcgtaggcggcgggaaaccgtccggacttccctccatcagcggg
gtcacgccggccatgatgagactcgccgagcggcagggcaccgtcacggcttcaccgggt
ccggctcaaggtccgctgcgggcgcgtgccgacgtcggggcgggggagacggcatcggtg
ccgggggacgccacgtcggcggacgaacgcgccggatcggtatggcccgccgtggagcgc
agcatcctcaacgagatcctcagccaccacaccacgctcgtgttcgtcaattcgcgtggg
ttggcggaacggctcaccgcgcggctcaacgacctgtacgccgccatacccggccacggc
gatgcggatgcgcctcggtcggatgaaccgtacgccggtcagcggcatttccatcccatg
gcggggccgtccacgaatctcatccatccgcatgcgccggaggacaccatcgccatggcc
caccacggatcggtgtccaaggatcgccgcaaacgcatcgaggaggacctcaaacacggc
cgactgcgctgcgtggtggccaccagcagcctggaactcggcatcgatatgggcagcgtg
gacctggtcatccaggtctccccgccgctatccgtatcctcggggctgcagcgggtcggt
cgtgccgatcatcaggtgggcggcgtctcccacgcgctgttctacccgttgacgcgcgag
cagatcatcggcgcggccgccaccgtggaatgcatgcagaccggcgacatcgagccgctt
tccataccgcgctgcccgctggacgtactggcccagcacacggtggccgccgcggctatg
gaggacctgaaccccgacgactggtatcagacggtgcgccgtgccgccccgttcgccgac
ctggaccgctccgtgttcgactcggtgctcggcatgctgaccggcgcctatgattccgag
gcgttcaccgccttccggcccagcctgatgtggaaccatgaggaacatctgatctccgct
cgtcccggggcgcagcggctggccgtcacctccggcggcacgatcccggaccgtggccag
tacacggtggtcctgccggagcaggaggcgggcaaagggcccaggcgcgtcggcgagctc
gacgaggagatggtctatgaatcccgcatcggcgacatcatcaccctcggcacctccacc
tggcagatccaggacatcacccacgaccgcgtggtggtggtgccggcacccggccgcacg
gcccgactgccgttctggcacggcgagggcttcgggcgcgatgccggattcggcgagatg
cagggccggttcgtgcgggatatggtcaatggcctgcacgacggcgattgcacggtggca
tccgttggtgtggcgccattcgattacccagcgtcatccgattgcgcggcatcgtccgac
ggcatgacgtcctcgtcggatgcggccgcattcgatgacggcacgacggatcgattgcgc
gcggacggactcgacggcaacgccatctccaacctggcccaactgctgcacgagcagcgc
atcgccaccggcgcggtgccgaccgaccgcacgctggtggtggagcgatgcccggacgag
gagggcgactggcggattgtgctccactcgccgtacggcaagcgcgtgcacgaaccgtgg
gcgatgatcgtcggcaaccggatcaagcagcgctacggatacgacggccaggtctacgcc
tgcgacgacggcatcatcctgctgctgcctcagtccgacgggcatatcccggccgccgag
ctgttcgcggtcgatcccgatgacatccaacggctggtggccgaacaggtgggggagtcg
gtgctgttcaccgcacgcttccgtgaatgcgcggcacgttcgctatacctgccgtgcacc
gacccgggcaagcgcgtgccgctgtggcagcagcgcttgcgtggcgtccaactgctcaac
gccgcgcggacgcagtgcaacttcccgctgctgctggagaccacccgcgaatgcctgcag
gacgtctacgacctgcccgcgctccggcggctgatgacacggctctccaacggtgagatc
gacgtggtcgatgtcgagacgcagacgccgtcgccgttcgccgaaaccatcatgttcggc
tatgtggggcaggtgatgtaccagtatgaccagccgcacgccgaacgcagcgcggccctg
ctctcgctggacttcgacgcgctggagcgcctgctcggcaccgccgacatgaccgcagtg
ctcgacccggacgtcatccacgacgtggaacgggaactggccgggcggacgttctggaac
gaactggacgagcgtgatgttgccggccgtgtggcccgatacgccaagactcatggcccg
ttcaccgttgacatgatgatggtggagctgcatctggacgccgaacgcgcggtgcgcgag
cttgacgggctcaaagcgcgcggcgaggtgctgaccggcttgttcatgacgaatccggga
cggggaaacggttctcgctcaaccgtcgatgatgcacaacctggtgaaggcgaggaatcg
tatgacggcatgggcaagcttgtcggcggcatggaaccagatgttgagatggcggatgac
cacaggccggttcagtatctgcatcgcgatgtgttccgccgcatccgcgcacgctcgctg
aacaaggcgcgtgaggccatcaaaccggtggcgccggcggtctaccaggcgttgctgctg
gaccgtcagggggtaggcccggtcggcggcgaacggtacgacggcgtggacgggctgatg
cgcgtcgtcgaacagctggagggtgtggccctgccgttgccgatatgggaaggcgcggtg
ttcccggcgcgggtgcgcggctaccagcccgccatgctggacgaactgctcgcctccggc
gacgtggtatggaccggggagaaaaccgccggtaccaaggccaaggaacccggccgcatc
gccttccatcccgccgattcggagctgctgtgcaataccgcggcagccgacgcaaccggg
catccatccgatggcgcgcccgacgacactatgaccggcgacactgcgcccgacgatgat
gcgggacaggcgttggagtctgtgcggacgctgcccgacgccatcctgcacgtcctggcg
gccggtggcgcgttccgggcggaacggctggcggaactggttcgcgcagcatggcggccg
gatacggagtcggtcgatcccgagaccggggagatccgcccctcggcctggtcgaacagc
caattcgaggacgccctgtggtcgctggtctggcagggcgcggtgaccaacagttcgctg
acgcccgttcgcgccatggcgtcggctgtgagctcccatgtcacgcgcagcgtatccgtg
ggccgcacacgccgccgcgcccgcgtgaccgtacaggtgccggtgctcatgcaggggcta
tggtcggccgtgccaaccgtcaccgccaccgccgaacagcgctcgctggcgcggatcgag
gttctgctggacaggtacggcatcatcgccacgccgttgatcgacgccgaggacgtgccg
ggcggcttctccgcgctgtatccggtgctgcgccgtatggaggagcacggcacgctggtg
cgcggcatgttcgtgcaggggttcggcgccgcgcagttcgcccggcgcgacaccgtggac
cagctgcgccatgcgggggaggggcacagccggtcctgtgtggccatcgaggtcatggat
cccgccaacctgaccggtgcggccgtggcctggccgcagtatggcggccaggccagcaaa
ccattgcggcgtgccggaggcatggtggtgctggaccacggcaccccggtggtctacgcc
gcggtcaagggccaccacctgaccacgttcaccgacgacggggacacgctgcgccgcgcc
ttcgccgaattcgcctatgccctgcagcgccgcccctccggcagcatcaccttcgccgac
ctcaacggcgaaccgttgaccgcccgcaccgaagccgcccgcatcctgcacgccgccggc
ttcaccccctgtccccagggcatgaagctgtaccggtga

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