Bifidobacterium pullorum subsp. gallinarum: ESN35_07925
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Entry
ESN35_07925 CDS
T06507
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bgx
Bifidobacterium pullorum subsp. gallinarum
Pathway
bgx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESN35_07925 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgx03019
]
ESN35_07925 (recQ)
03400 DNA repair and recombination proteins [BR:
bgx03400
]
ESN35_07925 (recQ)
Enzymes [BR:
bgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ESN35_07925 (recQ)
Messenger RNA biogenesis [BR:
bgx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ESN35_07925 (recQ)
DNA repair and recombination proteins [BR:
bgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ESN35_07925 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DEAD
RQC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QAY33910
UniProt:
A0A4P6DYI5
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All DBs
Position
CACC514:complement(1821402..1823348)
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AA seq
648 aa
AA seq
DB search
MNGAGGAAARALAALKRYFGYDSFRPGQEGLVETIMSGRDVLGVMPTGAGKSVCYQIPAA
LLPGVTIVVSPLISLMRDQVDALNDVGLNAAYINTTQNPDEQGMVLAQAAAGQVRLLYVA
PERLETERFRRFAAHVPIVLIAVDEAHCVSQWGQDFRSAYLGIGEFIASLPQRPAVAAFT
ATATERVRRDIVTLLGLRDPLVTVTGFDRPNLYFDVIRLENKHKAAWVAQYIAAHPQDSG
IVYCSTRKETEALAETINRTVPQLRAAARGGGAEPGPIAVAYHGGMLADRRGRAQRDFVT
DRVPVVVATNAFGMGIDKSNVRFVIHHNMPESIEAYYQEAGRAGRDGEPSRCTLLWNEGD
IVTRRRLLDTDNENERLNPEEREVVRMSRRRLLDGMIGYCRTTDCLHRYMTRYFGEPDDG
RDARCGNCSNCQSTFETIDVTDIARAISMCVHDVNQGFGSGKIVAVLRGSRAQDVVSRGL
DRCPTYGMLRDVPEARVRDVLSQMATDGFLFISEGRLPTVHFGARAGETRDEGFHYEIKR
VERRHGNAAGHGGTSRRGVGGPDAVAAQEAAELTEGDEALFERLRALRRTIAQEIGKPPY
IVFSDKTLRDMCAKRPASPEEFLEVNGVGENKLNLYGERFLAAIAEFA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgcgggcggtgccgcggcgcgggcgttggccgcgctcaaacggtacttcggc
tacgattcgttccgccccgggcaggaggggctggtcgaaacgatcatgtccggcagagat
gtgctcggcgtcatgccgaccggcgccggcaaatccgtgtgctaccagattcccgccgca
ttgctgccgggcgtcaccatcgtcgtctcgccgctgatctcactgatgcgcgaccaggtg
gacgcgctgaacgacgtgggcctgaacgccgcctacatcaataccacgcagaacccggac
gaacagggcatggtgctggcccaggccgccgccggacaggtcaggctgctgtatgtggcc
cccgaacgcttggaaaccgaacgattccgtcggttcgctgcacatgtgccgatcgtgctc
atcgccgtcgacgaggcgcactgcgtctcccaatgggggcaggatttccgttccgcgtac
ctgggcatcggcgagttcatcgcctcgctgccgcagcggcctgccgtcgccgccttcacc
gccaccgccaccgaacgcgtgcggcgggacatcgtcacgctgctgggcctgcgcgacccg
ttggtgaccgtcaccggattcgaccggccgaacctgtacttcgacgtcatccgcctggag
aacaagcacaaggccgcatgggtggcgcagtacatcgccgcgcacccgcaggactcgggc
atcgtgtactgctccacgcgcaaggaaaccgaagcgctcgccgagacgatcaaccgcacc
gtgccgcagctgcgcgcggcggccaggggaggaggtgcggaacccgggccgatcgcggtc
gcctaccacggtggcatgctggccgaccgacgagggcgggcgcaacgcgacttcgtcacc
gaccgggtgccggtggtggtggccaccaacgccttcggcatgggcatcgacaaatcgaac
gtgcgcttcgtcatccaccacaacatgccggaaagcatcgaggcatactatcaggaggcg
gggcgcgccggccgcgacggcgaacccagccggtgcacgctgctgtggaacgagggcgat
atcgtgacccgtcgccgtctgctcgacaccgacaacgagaacgaacggttgaaccccgag
gagcgcgaggtcgtgcggatgagccgacgccggctgctggacggcatgattggctactgc
cggaccaccgactgcctgcaccggtacatgacccggtacttcggcgagccggatgacggg
cgtgatgcgcgctgcggcaactgctcgaactgccagagcaccttcgaaaccatcgacgtg
accgacatcgcgcgggcgatcagcatgtgcgtgcacgatgtgaaccaagggttcggctcc
ggcaagatcgtggccgtgctgcgcggctcgcgggcgcaggacgtggtctcccggggactg
gaccgatgcccgacctacggcatgctgcgggacgtgcccgaagcgcgggtgcgggatgtg
ctgagccagatggccaccgacgggttcctgttcatctcggaggggcggctgccgaccgtg
cacttcggtgctcgggccggggagacccgagacgagggattccattatgagatcaagcgt
gtggaacggcggcacggcaacgctgcgggacacgggggcacatcacggcgtggcgtcggc
gggccggatgccgtggccgcacaggaggccgcggagctcaccgagggcgacgaggcgctg
ttcgaacggctgcgggcgttgcgccgcaccatcgcgcaggagatcggcaaaccgccgtac
atcgtgttctctgacaagaccctgcgtgatatgtgcgccaaacggccggccagccccgag
gagttcctggaggtcaacggcgtgggcgagaacaagctgaacctctacggtgaacggttc
ctcgcggccatcgccgagttcgcctag
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