Bifidobacterium pullorum subsp. gallinarum: ESN35_09825
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Entry
ESN35_09825 CDS
T06507
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bgx
Bifidobacterium pullorum subsp. gallinarum
Brite
KEGG Orthology (KO) [BR:
bgx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgx03032
]
ESN35_09825 (topA)
03400 DNA repair and recombination proteins [BR:
bgx03400
]
ESN35_09825 (topA)
Enzymes [BR:
bgx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ESN35_09825 (topA)
DNA replication proteins [BR:
bgx03032
]
Prokaryotic type
DNA Topoisomerases
ESN35_09825 (topA)
DNA repair and recombination proteins [BR:
bgx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ESN35_09825 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QAY33661
UniProt:
A0A4P6DUE6
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All DBs
Position
CACC514:complement(2249376..2252342)
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AA seq
988 aa
AA seq
DB search
MGNGTKLVIVESPTKARKIGGYLGNDYTVMASVGHIRDLAQPSQVPASAKAKFGKFGVDV
EDGFKPYYIVGSEKKKTVAELKAALKDADELYLATDEDREGEAIAWHLVETLKPKVPVKR
MVFHEITPEAIKASLDKTRDVDAHMVDAQETRRVLDRLYGYELSPVLWRKVGPGLSAGRV
QSVATRLIVERERERMAFVRAPYWDVSATLAAPDAEGQEVRFASRMVSLDGRRLAGSKDF
DTTGQLTPDGFAGNVRQLDEAQATAVATALEQAAFTVMSMETKPYRRRPQPPFTTSTLQQ
AAGNRLGMSSRQTMRAAQGLYENGYITYMRTDSVTLSQEAIEAARNAVEFHFGKAFLSDG
PKQYTTRTAGAQEAHECIRPAGARFRDPQELATKVPADQLKLYTLIWQRTLASQMADATG
STATVRLSAPAGTYGEAVFQASGTVIEFPGFMKATGEGRRTSAEAKTEQAAQPAGGAEPS
ASAAAASQATGRTAKAKQADSEENASLPPMHTGDVLHAVAVQADGHETQPPARYTEASLV
RTLEAKEIGRPSTYASIISTIIDRGYVYERGRALIPSWLAFAVTKLLETKFPKYVDYQFT
ADMENGLDQIAHGQESGRDWLTRFYFGSGDGAAANADEAHAGLQQQVAQLGEIDARAINT
IEIGDGLHVRVGRYGPYLEDMNHLDDQGNPKRASLPDTLAPDELTVEVGHELIEKNAGGP
RALGVDPATGGTVEVRNGRFGPYVALVPPEPAAPAAGESSDAKPAKRGTRSKAASAPKPK
MASLFKTMTPETLTLEDALKLLSLPREVGTVEETNAETGEVSQAVIAANNGRYGPYLTKT
GADGKSETRSLGSEDEIFTVDLEKAKELFSQPKYGRGRGRGAAKPPLRELGPDPETGKAV
TIKDGFYGAYITDGETNRTLPKQYTPESIDPAEAFRLLAEKRAAGPTKRRTRRTASSKSS
SKSATAKKTTTRKTTTKKKSMAAKTKAE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacggcaccaagctcgtcatagtggagtctcccaccaaggccaggaagatcggg
ggatacctgggcaacgactataccgtgatggcgtcggtgggccatatccgcgatcttgca
cagcccagccaggtgcccgcctccgccaaggcgaaattcggcaagttcggcgtcgacgtg
gaggacggattcaagccgtactacattgtgggcagcgagaagaagaagacggtcgccgaa
ctcaaggccgccctgaaggacgccgacgagctctatctcgccactgatgaggaccgcgag
ggtgaggccatcgcctggcatctggtggagaccctcaagcccaaggtgccggtcaagcgc
atggtgttccacgagatcacgcccgaggccatcaaggcgtcgctggacaagaccagggat
gtggacgcccatatggtcgacgcgcaggagacccgccgcgtgctcgaccgtctctacggc
tatgaactctccccggtgctgtggcgcaaggtcgggccgggcctgtccgcagggcgcgtg
cagtccgtggccacccgcctgatcgtggagcgtgagcgcgaacgcatggcgttcgtccgt
gcgccgtactgggatgtgagtgccacgctcgccgctcccgatgccgaaggccaggaggtg
cgcttcgcctcgcgcatggtgtcgttggacggcaggcgtctggccggttccaaggacttc
gataccaccggccagctgacgccggacgggttcgccggcaacgtgcgccagctggatgag
gcccaggccacggccgtggccacagcgcttgaacaggccgcgttcaccgtcatgtcgatg
gagaccaagccctaccgccgtcgtccgcagccgccgttcaccacctccacgctgcagcag
gcggccggcaaccggctgggcatgagctcgcgccagaccatgcgcgcggcgcagggactg
tacgagaacggctatatcacctacatgcgtaccgattcggtcacgctctcgcaggaggcc
atcgaagcggcgcgcaatgccgtggagttccatttcggcaaggccttcctgtccgatggg
cccaagcagtacaccacgcggaccgcgggcgcccaggaggcgcacgagtgcatccgtccg
gcgggcgcacggttccgtgacccgcaggagctcgccaccaaggtgcctgccgaccagttg
aagctgtacacgctgatctggcagcgcacactggcctcccagatggccgacgccaccggt
tcgaccgccaccgtccggctgtcggcgcccgccggaacctacggcgaggccgtgttccag
gcctccggcacggtcatcgaattcccgggcttcatgaaggccaccggggaggggcgtcgc
acgtccgcggaagccaagaccgaacaggccgcgcagccggctggcggcgcggaaccctcc
gcaagcgcggctgccgcgtcgcaggcaaccggccgtactgccaaggccaagcaggccgat
tccgaagagaacgcatcgctgcccccgatgcataccggtgatgtgctgcatgcggtcgcc
gtgcaggcggacgggcatgagacccagcctccggcgcgctacaccgaggcgtcgctggtg
cggaccttggaggccaaggagatcggccgcccgtccacatacgccagcatcatctccacg
atcatcgaccgcgggtacgtgtatgagcgcggtcgcgcgctgattccctcgtggctggcg
ttcgcggtcaccaagctgttggagaccaagtttcccaagtacgtggactaccagttcacg
gccgacatggagaacgggctggaccagatcgcgcacgggcaggaatccggccgcgactgg
ctgacccggttctacttcggatccggcgatggcgcggccgcgaacgcggacgaggcgcat
gccggcctgcagcagcaggtcgcacagctgggcgagatcgacgcccgggccatcaacacc
atcgagatcggcgatggcctgcacgtgcgcgtcggccggtacggcccgtatctcgaggac
atgaatcatctcgacgatcagggcaacccgaagcgcgcatcgctgccggacacgctcgcc
cccgacgagctgaccgtcgaggtcggccatgagctgatcgagaagaacgcgggcggccct
cgcgcactgggcgtggacccggcgaccggcggcaccgtggaggtgcgcaacggccgtttc
ggcccctacgtggcgctggtgccgcccgaaccggccgcgcccgccgccggggagtcctcc
gacgcgaagcccgccaagcgcggtacccgcagcaaggccgcttcggcccccaagcccaag
atggcgtcattgttcaagaccatgaccccggagaccctgacccttgaggatgcgctgaaa
ctgctgagcctgcctcgtgaggtcggcaccgtggaggagacgaacgccgaaaccggcgag
gtctcgcaggccgtcatcgcggcgaacaatggccggtacggcccgtacctgaccaaaacc
ggcgcggacggcaagtcggagacgcgctcgctgggcagcgaggacgagatcttcaccgtc
gacctggagaaggccaaggagctgttctcccagccgaagtacggtcgcggccgcggccgg
ggcgccgccaagccgccgctgcgcgagttgggcccggatccggagaccggcaaggccgtg
accatcaaggatggcttctacggcgcgtacatcaccgacggcgagacgaaccgcacgctg
cccaagcagtacaccccggaatcgatcgatccggccgaggccttccgcctgctcgccgag
aagcgagcggccggcccgaccaagcgccggacccgccgtacggcgtcgtccaaatcgtcg
tccaaatcagccacggccaagaagaccacgacccgcaagacgacgacaaagaagaagtcc
atggccgccaagaccaaggccgagtag
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