Bacillus glycinifermentans: BGLY_2112
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Entry
BGLY_2112 CDS
T04537
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bgy
Bacillus glycinifermentans
Pathway
bgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGLY_2112 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgy03019
]
BGLY_2112 (rny)
Messenger RNA biogenesis [BR:
bgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BGLY_2112 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_2
KH_NusA_2nd
DUF3450
Motif
Other DBs
NCBI-ProteinID:
SCA85935
UniProt:
A0AAJ4D2V5
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All DBs
Position
1:2044271..2045830
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AA seq
519 aa
AA seq
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MSPLTILISILLSLFCLVVGYYVRKIIAEAKISGARNAAEQILGDAKRDAEALKKEALLE
AKDEIHTLRIEAEQEVRERRNELQKQENRLLQKEENLDRKDESLDKREAMLEKKDHSLNE
RQQHIEEMESKVDEMIRKQQSELERISSLTRDEAKQIILDRVEKELSHDIAIMMKETENR
AKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDDYIRE
MGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLTGLMAAELGEDVTLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDQEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDSIND
LEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtccattaaccattctcatctccattttgctgagcctattctgtttagttgttggc
tactatgttcgtaaaatcattgccgaagcaaaaatttcaggtgcgcgcaacgcagccgaa
caaattcttggagacgcaaagcgggatgctgaagcgttgaaaaaagaagcccttcttgaa
gcaaaggacgagattcatacgcttcggatagaagctgaacaagaagttcgtgaaagacga
aatgagcttcaaaaacaagaaaaccgtttactccaaaaggaagagaaccttgaccgaaaa
gatgaatcgttagataaacgggaagcgatgttggagaagaaagatcattctctgaatgaa
cgacaacaacatattgaagagatggaaagcaaagtggatgaaatgattcgtaagcagcag
tcggaattggagcgtatttcaagtctgacgcgtgatgaagcgaagcaaatcattctggat
cgggttgaaaaagagctttcccatgacatcgcgatcatgatgaaagaaactgaaaatcgt
gcgaaagaagaggctgataaaaaagcgaaaaatattctttcattggctttacagcgctgt
gcggctgatcatgtggcagagacgacggtttccgttgtcaaccttccaaatgatgagatg
aaaggccgtattatcggacgtgaagggcgaaacatccgtacgttggaaacattgactgga
atcgaccttatcattgacgatacgccggaagccgttatcctttcaggatttgatccgatc
aggcgcgaaacagcaaggatcgctcttgataagctcgttcaggatggccgcattcatcct
gccagaatcgaagaaatggttgagaaatcccgccgtgaagtggatgattatattcgcgaa
atgggcgaacagacgacgtttgaggtaggagtccacggtcttcaccccgatttaatcaaa
atactcggccgcttgaagttcagaacaagctacggacagaatgtactaaaacattccatg
gaagtggcattcttgaccggactaatggctgctgagcttggagaagacgttacgcttgcg
aaaagagcgggccttcttcacgacatcgggaaggcgattgaccacgaggtggaaggaagc
catgtcgaaatcggcgtggaactggccaccaagtataaggagcatcctgtcgttatcaac
agtatcgcatcacaccacggggatcaggagccgacttccatcatcgccgtgctcgtggcc
gcagccgatgcgctgtcagccgcaagacctggcgcaagaagcgaaacgctcgaaaattat
attcgcaggcttgaaaaactggaggaaatctccgagtcctacgaaggtgttgagaaatcg
tttgcgatacaggccggacgggaagtgcggatcatggtgaaaccagactcgattaacgat
cttgaagcccatcgtttggcgcgggatattcgaaaacgaattgaggacgagctcgactac
cctggacatattaaagtaaccgtcatcagggaaacgagagccgttgaatacgcaaaataa
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